Girardinichthys multiradiatus (darkedged splitfin): 124870946
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Entry
124870946 CDS
T08099
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124870946 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124870946 (bard1)
04121 Ubiquitin system [BR:
gmu04121
]
124870946 (bard1)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124870946 (bard1)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124870946 (bard1)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124870946 (bard1)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
124870946 (bard1)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124870946 (bard1)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124870946 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_5
Ank_4
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-RING_10
zf-C3HC4_3
UPF0524
PTCB-BRCT
zf-RING_UBOX
zf-C3HC4_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124870946
NCBI-ProteinID:
XP_047225771
LinkDB
All DBs
Position
7:32053536..32083544
Genome browser
AA seq
800 aa
AA seq
DB search
MDNSTSLQGDDWKKTREAVANFRRLLLCSKCLNLMEEPVCLGMCEHMLCRSCAGPRAGDG
CAVCRSPAWVKDIQINRQLSSIIQLFSGMESLLNPKEQPDSSVAEVKSQAQAAVLKHKKN
FKIWFSPRSRKVRCKVEKPLEVTTPDKKFSGEQPAAHSNITTAQCQGLSVFNFTSSSQDS
SSSQSENNANKKEKKKPKKVAARRQVQGRTRTTRKQTKENMKKKRLEAINQQWGISEEQN
PSSGLELACADRARRSSKRVSFLSPAVTTHEPQTEVSQVDELCLTDSTKKEGLSGGKIDV
LSHQSQHGQSTFTAIASTNVPISDDNSNKDKNTSPHENPSKRNKAEERNCTLETTPKRPR
ASPGQRRKSPGGLSSPFAEHLTLASPMSEKNKKHPRRDEQRSPSIIALISSESQNKSLCS
PRSSVGRSSPGSPAVMKRNHKGETPLHLAAIKGDVDSVEELLDQGADPNLKDNAGWTPLH
EACNLGHLAAVKVLVSRGALLNTPGYENDSPLHDAVRNGHAAIVKLLLQLGASQNVLNLH
GKRPADYAVNQEMLEIFQETAEGTQNANSHTSHSPSATISVSSESVRRDQTLLLLASKLS
PPERHQLARLGVLLGGRIADAFSGSVSHVVVPEGQMPTTYSTLLGLLAGCWVVKYSWVEA
CLQAGKWLTEAEHEAGKGPQRSRINRCNLLPPLFDGCFFFLLGSFKGPTKDELARLLREG
GGQLLSRQPKPDSDVTQTLNAAAYHAEPGSDQALCTQYIIYDPQGTYKPAVVRRGKVWSA
PSTWIINCIGAFSLLPVPQH
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggataatagtacatcgctacagggagatgactggaagaagaccagagaggcggttgca
aacttccgtcgactgttgctttgctccaaatgcttaaatttgatggaggagccagtgtgt
ctggggatgtgcgagcatatgctgtgcaggtcttgtgctggcccccgggcaggagatggc
tgcgctgtgtgtcgcagccctgcgtgggtgaaggacatccaaatcaacaggcagcttagc
agcatcatacagctcttcagtggcatggagtccctgcttaatcccaaagaacaaccagac
tcctctgttgctgaggtcaaatcacaggcacaggctgctgtcctaaaacacaagaagaac
tttaagatctggttcagtccccgcagtcgaaaggtgcgttgtaaggtagagaagccttta
gaggtcaccactccagacaaaaagttctctggagaacagcctgcagctcactccaacatc
acaacagctcagtgccagggcctttcagtgtttaatttcacttcgtcctcccaagactct
tcatcttcacaaagtgaaaataatgcaaacaaaaaagaaaagaagaagcctaagaaagtt
gccgcaagaaggcaggttcaaggacgcactcgtaccacacgtaaacaaaccaaagagaat
atgaaaaagaaaaggctggaggccataaaccagcaatggggaatttcagaggagcaaaat
ccctcatctggactggagctggcctgtgctgaccgagcaagaaggtccagtaaacgggtt
tctttcctaagccctgctgtcaccactcatgagcctcagactgaagtatcgcaggtggat
gaactctgtttgaccgacagcacaaaaaaagagggtctctcaggagggaagatcgatgtc
ctgagtcaccaaagccagcatggtcagagcacattcactgcgatagcgtcaacaaatgtc
cccatttcagatgacaattccaataaagacaaaaacacatctccccatgagaatccctcc
aaaagaaacaaagcagaggagagaaactgcaccttggaaaccacaccaaaaagacccagg
gcttctccgggccaaaggagaaaatcaccaggtggactatcttcaccttttgctgagcat
ttaactttagcaagcccgatgagtgaaaagaacaagaaacacccgagacgagatgaacag
cgtagtccctctattattgcacttatatcttcggaaagccaaaacaaatccttgtgcagt
cctcgatcatctgtcggccgttcaagccctggaagcccagcagtaatgaagagaaaccac
aagggagagacccctctgcatcttgctgcaataaagggagatgtagattctgtcgaagaa
ctgctggaccagggagcggaccccaacctgaaagataatgctggctggacgcccctgcat
gaggcatgtaatctgggccacctggcagctgtgaaggttttggtctcaagaggtgccctg
ttgaacacacctggctatgaaaatgattctccactccatgatgctgtgaggaatggacat
gcagccattgttaagctgctgctgcagcttggtgcctcgcagaatgttcttaatctgcat
ggaaagcggcctgcagattatgcagtgaaccaggagatgctggagattttccaggaaact
gcagaaggaacccaaaatgctaattctcatacatctcatagcccctcagcaaccatctct
gtgtcgagtgagagtgtgagaagggaccagactttactgttattggccagcaagctgtcg
ccaccagagcggcatcagctggccaggctgggagtgctactgggagggaggattgccgat
gccttttctggctcagtgagccatgtcgttgtgccagaaggacaaatgcccaccacctac
tccaccctcctgggtcttcttgccggctgctgggttgtcaaatacagctgggtggaggca
tgtctccaggcggggaagtggctgactgaagctgagcacgaagcgggaaaaggccctcag
cgcagtcgcatcaacagatgcaatttgctgccgccgctcttcgatggctgtttcttcttc
ctcctgggctcctttaaagggccgaccaaggacgaacttgcaaggcttttgcgagaagga
ggtggccaacttttgagccggcagccgaagccggacagcgatgtgacacagactctgaat
gcagcagcctatcatgccgagccgggctctgaccaggccctctgcacccagtacatcatc
tacgatccgcagggaacctacaagccagcagttgtcagacgagggaaggtatggtcagct
ccctctacctggatcatcaactgcattggagccttcagcctccttcctgtgcctcaacat
taa
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