Galeopterus variegatus (Sunda flying lemur): 103589447
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Entry
103589447 CDS
T08727
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04613
Neutrophil extracellular trap formation
gvr05014
Amyotrophic lateral sclerosis
gvr05034
Alcoholism
gvr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
103589447 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103589447 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103589447 (HDAC6)
09165 Substance dependence
05034 Alcoholism
103589447 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gvr01009
]
103589447 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gvr03019
]
103589447 (HDAC6)
04131 Membrane trafficking [BR:
gvr04131
]
103589447 (HDAC6)
03036 Chromosome and associated proteins [BR:
gvr03036
]
103589447 (HDAC6)
Enzymes [BR:
gvr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103589447 (HDAC6)
Protein phosphatases and associated proteins [BR:
gvr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103589447 (HDAC6)
Messenger RNA biogenesis [BR:
gvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103589447 (HDAC6)
Membrane trafficking [BR:
gvr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103589447 (HDAC6)
Chromosome and associated proteins [BR:
gvr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103589447 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103589447
NCBI-ProteinID:
XP_008569659
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHKPQSPPHDSSVSSKRNVKKGAVSRSSTNLAEVKKKGKAKKLS
QAPEEDLVMGLQGLDLNREAKALAGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEFIDLMETTQYMNEGQLRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIQNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHGIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESIGAPCQSA
QASLSCTLEALEPFWEVLVRSAETLEEDNVEENEEGPWEPPALPILTWPVLQARTGLVYD
QRMMSHYSLWDSYHPEMPQRILHIMCSLEELGLAKRCLTLPARPATEAELLTCHSAEYVH
RLRATEKMKSRELHLESANFDSVYICPSTFTCAQLATGAVCRLVEAVLAGEVLNGTAVVR
PPGHHAERDFACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHIFEEDPSV
LYVSLHRYDRGTFFPVGDEGASSQVGRAAGTGFTVNVAWNGPHMGDADYLTAWHRLVLPI
AYEFNPELVLVSAGFDAALGDPLGCCQVSPEGYAHLTHLLMGLANGHIILILEGGYNLTS
ISESMAACTRSLLGDPPPLLALQRPPQSRALASITETIQVHRRYWRSLRVMKVEDKEGTS
SSKSVINNTPQSANPESAKGMTTTEESLLEAGMGKATSELSVEEFTPGQTMSETAVVALI
QDQSLEAATGGAMPDQTTLEAAMGEATLDQTISEEVVGGAMLEKTTSEKTLRGATLSQTT
SEAATGGATLDQNTSEKAVGDAELIQTPLASCTDNQTPPVSLMQGATPQSCPSMLIRSLR
TLELGNKAQEALEFQTPEEESLPGEAAGGQDIDDSMSMQGFVDLADTDQVTFYAVTPLSW
CPHLVAVCPIPAAGLNVTQPCRDCGTYQENWVCLSCYEVYCSRYINAHMIQHHEASGHPL
VLSYVDLSAWCYLCQAYVHHQALVDVKNIAHQDKFGEDGPHLH
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcacaagccc
cagtcaccccctcacgactccagcgtctcctcgaagcgaaatgttaagaagggcgctgta
tcccgctccagcaccaatctagcggaggtgaagaagaaaggcaaagcgaagaagctcagc
caagcacccgaagaagacctagtcatggggctgcaagggctggatctgaaccgtgaagcc
aaggcactggctggaactggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggagcagctgatc
caggagggccttctggatcgctgcgtgtcctttcaggcccgctttgccgaaaaggaggag
ctaatgttggttcacagcctagaattcattgatctgatggagacgacccagtatatgaat
gaggggcaactccgcatcctagcagacacctatgattcagtttatctgcatccgaactca
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtagatgcggtcctgggg
gctgagatccagaatggcatggccatcatcaggcctcctggacaccatgcccagcacagt
cttatggatgggtattgcatgtttaaccatgtggctgtggctgcccgctacgctcaacag
aagcatggcattcagagggtccttattgtggattgggatgtgcaccatggccaaggaacg
cagttcaccttcgaccaggaccccagtgtcctctatttctccattcaccgctacgagcag
ggtcggttctggccccaccttaaggcctctaactggtctaccacaggttttggccaaggc
caaggatacaccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgccttcctgcacatcttgctgccagttgcccttgagttccagcctcagctagtcctg
gtggctgctggatttgatgccctccaaggggacccaaagggcgagatggccgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcagaaggcaagctgatcctg
tctctggagggtggctacaacctccgctccctggctgagggtgtcagcgcctcgctccac
acccttctgggagacccttgccccatgctggagtccattggtgccccctgccagagtgcc
caagcttctctctcctgcacgctggaagccctcgagcccttctgggaggtccttgtgaga
tcagctgagaccctggaggaggacaacgtggaggagaatgaggaaggaccctgggagccc
cctgcgcttccaatcctgacatggccagtgctgcaagctcgcacagggctggtctatgac
caacgtatgatgagtcactacagcttatgggacagctaccaccctgagatgccccagcgc
atcttgcacatcatgtgcagtctggaggagctgggccttgccaagcgctgcctcaccctg
cccgcacggcccgccacagaagctgagctgctcacctgccatagtgctgagtacgtgcat
cggcttcgggccacagagaagatgaaaagccgggagctgcacctcgagagtgccaacttt
gactccgtctacatctgccccagcaccttcacctgtgcacagctcgccacaggcgccgtc
tgccgcctggtggaggctgtgctggcaggagaggtcttgaatggtactgcggtggtgcgc
cccccaggacaccacgccgagcgggactttgcttgtggtttctgctttttcaactctgtg
gctgtggctgctcgccatgcccaagccatcagtgggcgtgccctgcggatcctgatcgtg
gattgggacgtccatcatggtaatggaactcagcacatatttgaggaggaccccagtgtg
ctatatgtgtccctgcaccgctatgatcgtggcaccttcttccctgtgggggatgagggc
gccagcagccaggtgggccgggctgcaggcacaggcttcactgtcaacgtggcctggaat
gggccccacatgggtgatgctgactacctgactgcctggcatcgtctggtgcttcccatt
gcctacgagtttaacccagaactggtgctggtctcagctggctttgatgccgccctgggg
gacccactcgggtgctgccaggtgtcgcctgagggttatgcccatcttacccacctgctg
atgggccttgccaatggccacattatcctgatcctagagggtggctataacctgacatcc
atctcggagtccatggccgcctgcacccgctccctccttggagacccaccacccctgctg
gccctgcagcgaccccctcagtcaagggccctggcctcaatcactgagaccatccaagtc
catcgcagatactggcgcagcttgcgggtcatgaaggtagaagacaaggagggaacctcc
agttctaagtcggtcatcaataatactccccaatcagccaatcctgagtctgctaagggg
atgaccactacagaagagagccttttggaagcaggcatggggaaggccacctcagagtta
tctgtggaagagttcactccaggccagactatgtcagagacagctgtggtggcactcatt
caagatcagtccttggaggcagccacagggggagccatgccagaccagaccaccttggag
gcagccatgggggaagccacgctggaccagaccatctcagaggaggttgttgggggagct
atgctggaaaagaccacctcagagaagactctgaggggagccacactgagccagaccacc
tcagaggcagctactgggggagccacgctggaccagaacacctcagagaaggctgtgggg
gatgctgagctgatccaaactcctctagcctcatgcacagacaaccagacccccccagtc
tcactcatgcagggagccacaccccagtcatgtcccagtatgctgattaggagtctcagg
accttggaacttggcaacaaagctcaggaggccctagaatttcagaccccagaagaggag
agcctaccaggagaggcagctggaggtcaggacatagatgattcgatgtcgatgcaggga
tttgtggaccttgctgacactgaccaggtcacattttatgctgtgacaccactgtcctgg
tgtccccatttggtggcagtatgccccatacctgcagcaggcctgaatgttacccaacct
tgtcgggactgtggaacataccaggagaattgggtgtgtctgtcttgctatgaggtctac
tgcagtcgttacatcaacgcccatatgatccaacaccatgaagcctctggacacccgctg
gtcctcagctatgttgacctgtctgcctggtgttacctctgtcaggcttatgtccaccac
caggctcttgtagatgtgaagaacatcgcccaccaggacaagtttggggaggacgggccc
cacctgcactaa
DBGET
integrated database retrieval system
