Homarus americanus (American lobster): 121863272
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Entry
121863272 CDS
T07477
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hame01009
]
121863272
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121863272
04131 Membrane trafficking [BR:
hame04131
]
121863272
03036 Chromosome and associated proteins [BR:
hame03036
]
121863272
Enzymes [BR:
hame01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121863272
Protein phosphatases and associated proteins [BR:
hame01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121863272
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121863272
Membrane trafficking [BR:
hame04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121863272
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121863272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
PRY
Motif
Other DBs
NCBI-GeneID:
121863272
NCBI-ProteinID:
XP_042217779
LinkDB
All DBs
Position
Unknown
AA seq
2020 aa
AA seq
DB search
MEDKKVLPPPRKNSGKSQKAQEQGAGGGGGSNGENEGGEAAPTSKSRKLAGIRPRISIEE
LRNVFKRQASVAQEEGDPIFDPMAKAQGSMKIVRGKTGVVYDERMAQHRCLWDQNYPECP
ERLLHTLERCKDLGLLNRCETLVSRAATEEELLKVHSIAHLGLLWSTMGETDTEKLEQLS
SHFDSIYLHPSTYENSLLAAGSTLDLVDAVASGRLQNGFALVRPPGHHAMESELCGYCYL
NNVALAVRHALEKHSLSRILIVDWDVHHGQASQYAFYSDPRVLYFSIHRYQQGSFWPHLR
ESNYNYVGEGTGQGFNFNVPLNKIGMRNEDYLAIFHQVLLPVAYEFNPELIIVSAGYDAA
VGCPEGEMDVSSGFYSHLTSSLMTLAQGRVAVVFEGGYCLDSLAEGAAMTLSTLLGDSCP
ILLDPIKEPSSSLRETLLNLIYVQRPYWKCFQYQGSFSVREESNEAVKARHTPSLTFLGL
NARPLRFPTREVHIVQSPELLERIKSKLLQLKLKERTRALPGGKLCLVYDEEMSRHRSLS
GAEHPERPERTEQIWEYLKQYGIIERATVLKSRRATREEVELVHTKDHVDFMFNIGSLSQ
KELESLQDKYKSIYFHSMSNDAALLASGSLLQVVDSVCNNKISSGIGVVRPPGHHAERDH
PHGFCFYNNVAVAARYALKQYGYQRVMILDWDVHHGNGIQHTFESDPHVLYISIHRYDQG
LFFPSSEDANYDRVGTGAGEGYNVNIPWNKSGLGDAEYISAMLQVVLPIAYQYDPQLVLV
SAGFDAARGDPLGGCRVTPECYGHMTRLLSSLAGGRIVLALEGGYNLNTISYCMTMCAKA
LLGDPLPMLDASLVPNKGAVQTINDVIRTQSQYWSALCFQVDLPVEDVLCQGFGGGPQAV
ESGASGSEASSCTSSPVSTPSTNSPPYISAPSSPGKSNAFRLTGPGRAAPMACGESETRI
CTSEMQVDSCTQFSVTAQPQDEANPSGKKKKIGTKNKTGSSPAGKALEAPPQIKEQCKKV
RRRSERQEVPPNPERSNFPLTPTRPGRPRSDGALRAAAASVDMLKGPTAVISNEDYCNVC
CVEYMQGPGIIKAIIERCKELKLLEKCTRLKPRPATEAEILAVHGEERLKAIPRGTRKCI
YHPVDGDDILTAAGSTVELVQEIVSGKAQNGIAIIIPSGHLVSGSSTPPSGYLNNTAIAA
RYALDNLGLSRVLIVDWDGQHGIGTQHIFYSDPRVLVFSVLLHSSQDPEEGDKNKTGILE
GHGYNFNVKLNCHVFQNEDYYSVFHQVLLPVAYEFSPELVIVSAGFELALHSENIHPGIY
SHLTAMLMPIAQGRLAVVLEAGKCKEAMAEGVAATLRTLLDKPSEPMPMPLNDPSPEVKK
AITEVMTAQKTNWDSIRYHAQTSLISYKPKVDSSPVIKPLKHPYSHHLQKLGESIPSPKY
TVCLVYDDSMMEHFNYKDETHPERPERISCIYQRLQEFGVVGRCHRIKARKATVSDLESV
HSSKHIKFMSSLMTKKPQELLSAENKLESIYLHRRTNNAALMAAGSLVAVVDSVMSGESQ
RGMAVVRPPGHHAERDNACGFCFYNNVAIAAKHAINTHGLQRVLILDWDVHHGNGIQQMF
ESDPQVLYISVHRYDNGKFFPASSEGNYNRVGTKEGKGYNVNIPWNKRGMGDGDYVATMV
EVVLPIAYEFKPQLVLVAAGFDASVGDPLGGCSVTPECYGHMTKLLMCVAEGRVILALEG
GYNLASISYCMTMCAKALLGDPLVPLAQNLTPCISAIETLTNVVSVHKKFWSALNLKNEA
LSPLGHISSSRRDTGGASPKLKCKTDNSVSQSPNKKFDDLDELTETLDRVKLVDTDKGVG
ASSDKVQGEESHNEEMEEDVVAEGGACGGSAGDNVNTFLLSELAAAEEMFAVIPATWCPH
LEEVKPVPRNGLKTSSPCEECQDPTENWICLTCYKVLCGRFVNEHMMMHGLMEEHKMVLS
FSDLSVWCYACDVYVHHQILHEAKRAAHLDKFGEDIPEFS
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagaaggttctcccgcctccaaggaagaactcagggaagagccagaaggca
caagagcagggtgctggaggaggcggagggagcaacggggagaatgaaggaggtgaggct
gcgccaacttccaagagtcgtaaattagcaggtattcgaccccgtatttccatcgaagaa
ctcaggaatgtcttcaaacgacaagcttctgttgctcaggaggaaggagatccaattttt
gatcccatggccaaggctcaaggtagtatgaagattgtgcgtggcaagacaggtgtagta
tatgatgaacgcatggctcagcatcgctgcctctgggaccagaactaccccgagtgtccc
gagaggttattacacactttggagaggtgtaaagacctgggcttgttgaatcgctgtgag
accctagtgtcacgtgcggccacagaagaagaattactgaaggttcattccattgcacat
ctgggcctcctgtggagcactatgggggagactgacactgagaaacttgagcaactttct
tcacactttgattccatctatcttcatccatctacatatgaaaactcgcttctggcagct
ggcagcactttggacctggtagatgctgtagcatcaggaagactgcagaatggctttgct
cttgtcagacctcctggccaccatgctatggaatcagagttatgcggatactgttatctc
aacaacgtggccctggcagttcgtcacgccttagaaaaacacagcttgtcccgcatcctc
atagtagactgggatgttcaccacgggcaggcctcccaatatgcattttattcagacccc
agggtgttgtacttctccatacaccgctaccaacaagggagtttctggccacacttaaga
gagagtaattacaactatgttggagaaggaactggccagggatttaacttcaatgttcct
cttaacaagattggtatgaggaatgaagactacctggccatatttcatcaagttctcctt
ccagtggcttatgagttcaacccagagctcatcattgtatcagcggggtatgatgctgct
gttgggtgtcctgagggagaaatggatgtgtcatcaggcttctactcccaccttacttcc
agtttgatgacgttggcccaagggagagtggctgtagtttttgagggtggatattgcttg
gactccttagcagaaggtgcagcaatgactctgagcacactgcttggagactcatgcccc
atactgctggaccccatcaaggagccatcatcgagtttgcgtgagacacttctgaacctc
atttatgtccagcggccatattggaaatgcttccagtatcaaggatcattttcagtgaga
gaagagtccaacgaggctgtcaaagcaagacatactccgtcccttacatttctgggactg
aatgccagacctctcagattcccaacaagggaagttcatattgtgcagtcaccagagctg
ctagagagaataaaatcaaagctgcttcagttgaaattaaaagaaaggaccagggctctg
ccaggaggtaaactctgcttggtttatgatgaagaaatgagtcgtcacagaagtttgtca
ggagcggagcatccagagagacctgaaagaacagaacaaatttgggagtacctgaaacag
tatggtataatagaaagagcgactgttcttaagtcaagacgagcaactcgagaagaagta
gaacttgtgcacaccaaagaccacgtagactttatgtttaacattgggtctttaagccag
aaagaactcgagtccctgcaggataaatacaagtctatttacttccattccatgagtaat
gatgctgctctgctggcatctggtagtctcctgcaggttgtggatagtgtttgtaacaac
aaaatctcaagtggcattggtgtggtgcgtccccccggccaccatgctgaaagggatcat
ccacacggattttgtttctataacaatgttgcagttgctgctagatatgctctcaagcaa
tatggataccaacgagtgatgatcttggactgggacgttcaccatggtaatggtatccag
cacacctttgaatctgacccacacgtcctctatatctccatccaccgatatgatcaaggc
ctcttctttccctcctccgaagatgcaaattatgaccgagttggaacaggagctggggaa
gggtacaatgttaacatcccctggaacaagagtggtttgggagatgcagaatacatatca
gccatgctacaggtggtgctgcccatagcctaccagtatgacccccagttggtcctggtt
tcagctggctttgatgctgcccggggagacccacttggaggctgtcgtgtcaccccggag
tgttatggccacatgacacgcctactgtcaagtctagctggtggccgcattgtgctggca
ctggaaggtggctataacctcaacaccatcagctactgcatgaccatgtgtgccaaggca
cttctaggtgaccccctgccaatgctggatgcatcactggttccaaacaagggtgctgtg
caaaccatcaatgatgttatcaggactcagtcacaatattggtctgccctgtgtttccag
gttgatcttccagtagaagatgtactttgtcaagggtttgggggaggacctcaagctgta
gagtctggagcatcaggctcagaagcatcttcctgcacttcttctcctgtttcaactcca
tccacaaattcccctccatatatctctgctccttcctccccaggaaagtcaaatgcgttt
agacttactggacctggaagagctgctccaatggcgtgtggtgaaagtgagactagaatt
tgtacaagtgaaatgcaagttgattcttgcacacaattttctgtgacagcacaaccacag
gatgaagcaaacccctcaggaaaaaaaaagaagattggcacaaagaataaaacaggttct
tctccagcaggcaaagctcttgaggcaccaccacaaataaaagaacagtgtaaaaaggtg
agaagaagatctgagagacaagaggtgccacccaatcctgaacggagcaattttccattg
actcctacgcgtcctggcagacctcgaagtgatggagcgctccgtgctgctgctgccagt
gttgatatgttgaaaggtccaactgcagtcatatctaacgaggattattgtaatgtttgt
tgtgtggagtatatgcaaggtcctggaatcataaaagccatcattgagcgctgtaaagaa
ctgaaattgttggagaagtgtactagacttaagccaagaccagccactgaggcagagata
ttggcagtccatggtgaagaaaggctaaaggctattccaagaggaacaagaaagtgtatt
taccatccagtagatggtgatgatatcctgacagctgcaggaagtactgttgagttggtg
caggaaatagtatcaggcaaagctcagaatggtattgctattataataccttcaggtcac
ttggtgtcaggcagtagtacacctcccagtggctatttgaataacacagccatagcagcc
cggtatgcgttagataacttgggccttagtcgggtgttaatagttgactgggatggtcaa
catgggattggcactcaacacatcttctacagtgatccaagagtcttggtattttctgta
ctcctgcacagtagccaggacccagaggaaggtgataaaaataaaacaggaatccttgaa
ggccatggctataattttaatgttaaacttaactgccatgtctttcagaatgaagattac
tattcagtcttccaccaagtgttgttaccagtagcctatgaattttctccagaactggtc
attgtctctgctggttttgaattagcattgcattctgaaaacattcacccaggaatctac
tcacatctgacggctatgctcatgcccatagcacagggtcgtctggcagtggtgctggag
gctgggaaatgcaaagaagccatggcagaaggagtggcagctactttacgcacactcctg
gataaaccgtctgaacctatgccaatgccattgaatgatccttcaccagaagtaaagaaa
gctataactgaggtcatgacagcacagaaaactaactgggacagtataagatatcatgct
caaacttcactcatctcttataaaccaaaagtggattcttctcctgtcattaagccactt
aagcacccttactcccaccaccttcaaaaacttggtgagagtatcccaagccccaaatac
actgtgtgtcttgtgtatgatgactccatgatggaacacttcaactacaaagatgaaact
catcctgagaggccagagagaataagctgcatctatcagcgtctgcaggagtttggtgtg
gttggccgctgtcatagaatcaaggcaaggaaagcaacagtgagtgatctggagagtgta
cacagctccaagcacatcaagttcatgtcatccctcatgactaagaaacctcaagagctt
ctcagcgctgaaaacaaacttgaatccatctacctccaccgtcgcaccaataatgcagct
cttatggctgccggctccctagtagcggttgtggacagtgttatgtccggtgagagtcaa
cgtggcatggcagtagtgcgtccccctggccaccatgcagagagggacaatgcttgtggt
ttctgcttttacaacaatgtagccattgctgccaaacatgccattaacacccatggtcta
caaagagtcttgatcttggactgggatgtccatcatggtaatggaatccagcaaatgttt
gagtccgacccacaagtcttgtatatatctgtccaccgctatgacaatggaaagttcttc
ccggccagctctgagggcaactataacagagtaggcaccaaggaagggaagggatataat
gtgaacatcccctggaacaagagaggcatgggtgacggtgactatgtggcgaccatggtg
gaggtggtgctgcccattgcatatgaattcaaaccccaacttgtgctcgtcgcagctggc
tttgatgcatctgttggagatcctcttggtggctgcagtgtgactcccgagtgttatgga
cacatgaccaagttactgatgtgcgtagccgagggtcgtgtcatcttggccctggaaggc
ggttacaacctggcctctatcagctattgcatgaccatgtgtgccaaggccctgctgggt
gaccccctagttcctctggcccagaatttgacgccttgtataagtgccatagagactctg
accaatgttgtttctgtacataaaaaattctggtctgcactaaacttgaagaatgaagcc
ttatcacctctaggtcacatttcatcatccagaagagatacgggaggagcatcacccaaa
cttaaatgtaaaactgacaattcagtttcacaatctcccaacaagaaatttgatgatttg
gacgagctgacagagaccttagatcgagtgaagctggttgatacagacaaaggtgtaggg
gcttcctcggataaggtacaaggagaggaatcacacaatgaggaaatggaagaggatgtt
gttgctgagggtggagcatgtggaggctcagcaggtgataatgtaaacaccttcctgcta
tctgaattggctgctgccgaagagatgtttgcggtaattccagcaacttggtgtccccac
ctggaagaagtgaaacctgtacctcgtaatggactaaagacttccagcccctgtgaagag
tgtcaggaccctactgagaattggatctgtcttacctgctacaaggtactgtgtggacgg
tttgtgaatgagcatatgatgatgcatgggctgatggaggaacacaagatggtgctaagt
ttctctgacctgtctgtgtggtgctacgcctgtgatgtttacgtccaccaccaaatctta
cacgaagccaagcgagcagctcatctggataagtttggcgaggatattcctgaattttca
tga
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integrated database retrieval system
