Hyaena hyaena (striped hyena): 120221025
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Entry
120221025 CDS
T07257
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv04613
Neutrophil extracellular trap formation
hhv05014
Amyotrophic lateral sclerosis
hhv05034
Alcoholism
hhv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
120221025 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
120221025 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
120221025 (HDAC6)
09165 Substance dependence
05034 Alcoholism
120221025 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhv01009
]
120221025 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120221025 (HDAC6)
04131 Membrane trafficking [BR:
hhv04131
]
120221025 (HDAC6)
03036 Chromosome and associated proteins [BR:
hhv03036
]
120221025 (HDAC6)
Enzymes [BR:
hhv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120221025 (HDAC6)
Protein phosphatases and associated proteins [BR:
hhv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120221025 (HDAC6)
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120221025 (HDAC6)
Membrane trafficking [BR:
hhv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120221025 (HDAC6)
Chromosome and associated proteins [BR:
hhv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120221025 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120221025
NCBI-ProteinID:
XP_039074207
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGAKKGAVLSSSPSLAEVKKKGRMKKLS
QAAEQDLIVNIQGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
LASLCCSLEALEPFWEVLVRSAETPEEDILEEESTEEKDEEGLWQPPALPILTWPMLQAR
TGLVYDQRMTGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLTLPARPATEAELLTCH
SAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLN
GTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQALSGRALRILIVDWDVHHGNGTQHMF
EEDSSVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCHVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACIRSLLGDPPPLLTLSRPPLSGALASITETIRVHRRYWRSLRVMKVE
DKEEPSLSKSVTKNVTEPANPDSAKRMTTPEGNILDAGTWKAVSASSVEESTLGQAKSET
AMVELSQDQSSEAPTREATLDQTTSEADTGGATLDQTTSEETAGVVEITQTLSALCTDNQ
TLPASPEQGAASQISPNELIENLRTLEINCKAEEAPESQIPEEEKLLGEAAGGQDINDSV
LMQSFEVRANTDQAVFYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGALQENWVCLSC
YQVYCGRYISAHMLQHHEGSGHPLVLSYVDLSTWCYNCEAYVHHQALLEVKNIAHQNKFG
VDMPHSH
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacgggccaagattccaccacaaccaggcagcgaaggagtaggcataaccct
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgctaagaagggtgccgtg
ctttcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcggagcaagacctaatcgtgaacattcaagggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgaacggctccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggacgag
ctgatgttggtgcacagcctagaatacattgacctgatggagacgacccagtacatgaat
gagggagagctccgcatcctagcagacacctatgactcagtttatctacatccgaactcc
tatacctgtgcctgcctggcttcaggctctgtgctcaggctggtggatgctgtcctcggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccatggtcaaggaacc
cagttcacctttgaccaggatcccagcgtcctctatttctccatccaccgctatgagcag
ggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggccatggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgctgactacatt
gccgctttcctgcacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgccctccaaggggaccccaagggcgagatggccgccactcca
gcgggattcgctcagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgctccttggctgagggcgtcagtgcctcactccac
acccttctgggagacccgtgccccatactggagtcccctggtgccccctgcccaagtgcc
ctggcatcactctgctgctctctggaagccctggagcccttctgggaggtccttgtaaga
tcagctgagaccccagaggaggacatcctggaggaggaaagcacggaggagaaggatgaa
gagggactgtggcagcccccagcgctcccaatcctgacatggcccatgctacaggctcgc
acggggctggtctatgaccagcggatgacaggccaccacaacttgtgggataaccaccac
ccagagatgcctcagcgagtcttacggatcatgcagcgtttggaggagctgggccttgcg
gggcgctgcctcacactgcctgcgcgtcctgccaccgaagccgaactcctcacctgccac
agtgccgagtacgtgggtcgtctgcgggccacagagaagatgaaaacccgagagctgcac
cgcgagggctccaactttgattccatctacatctgccccagcaccttcgcctgtgcgcaa
ctggccactggcgccgtttgccgcctggtggaggctgtgctggcgggagaggttttgaat
ggtaccgctgtggtgcgacccccaggacaccatgccgagcgggatgccgcttgtggtttc
tgcttttttaattctgtggctgtggctgctcgccatgcccaggccctcagtgggcgggcg
ctgcggatcctgatagtggactgggacgtccatcatggtaatggaactcagcatatgttt
gaggaggactccagcgtgctgtacatttccctgcaccgatatgatcacggcaccttcttt
cccatgggggaggagggtgccagcagccagataggccgggccgcgggcactggcttcact
gtcaacgtggcctggaatggacctcgcgtgggtgacgccgactacttggctgcctggcat
cgcctggtgcttcctattgcctacgagtttaacccagagctggtgctagtctcagcaggc
tttgatgccgcatggggagacccgctggggggctgccacgtgtcacctgagggctatgcc
cacctcacccacctgctgatgggccttgccaatggccgcattatcctcatcctagagggt
ggctataacctgacatccatctcagagtccatggctgcctgcatccgctccctccttggg
gacccaccaccactgctgaccttgtcgcggcccccactatcaggggccctggcctcgatc
actgagaccatccgagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaa
gacaaggaggaaccctccctttctaagtcagtcaccaagaatgtgaccgaaccagccaac
cctgactcagctaagaggatgaccacaccagaagggaacattctggatgcaggcacatgg
aaggctgtctcggcatcatctgtggaagagtccactctaggccaagctaagtcagagact
gctatggtggagctcagtcaggaccagtcctcggaggctcccacacgggaagccacgctg
gaccagaccacctccgaggcagacacaggaggggccacgctggaccagaccacctcagag
gagactgctggggtagttgagataacccaaaccctttcagccttatgtactgacaaccag
actctaccagcctcacctgagcaaggggccgcatcccaaatatcccccaatgagctgatt
gagaatctcaggactttggaaataaactgcaaggctgaggaggcaccagaatctcagatc
ccagaagaggagaagctactgggagaggcagctggaggtcaggacataaatgattcagtg
ctgatgcagagctttgaggtccgtgctaacactgaccaggccgtcttttatgccgtgaca
cctctgccctggtgtccccatttggtggcagtatgtcccatacccgaatccggcctggac
gtgacccaaccttgtcaggactgtggagcactccaggagaactgggtgtgtctgtcctgc
tatcaggtctactgcggtcgttacatcagtgcccatatgctgcaacaccacgaagggtca
ggacacccgctggtccttagctacgttgatctgtctacctggtgttataactgtgaggcc
tatgtccaccaccaggctctcctagaagtgaagaacatcgcccaccagaacaagtttggg
gtggacatgccccactcacactaa
DBGET
integrated database retrieval system
