Heterobasidion irregulare: HETIRDRAFT_324562
Help
Entry
HETIRDRAFT_324562 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hir01009
]
HETIRDRAFT_324562
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_324562
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_324562
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_324562
Enzymes [BR:
hir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
HETIRDRAFT_324562
Protein phosphatases and associated proteins [BR:
hir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
HETIRDRAFT_324562
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
HETIRDRAFT_324562
Membrane trafficking [BR:
hir04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HETIRDRAFT_324562
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
HETIRDRAFT_324562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
20671063
NCBI-ProteinID:
XP_009549035
JGI:
Hetan2_324562
UniProt:
W4K0R7
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MDVDVRPVTDNAAVSRGASEEGRASSVPVPASDLAVGFVYAPEMLLHSFESSDPEADHPE
RPERIAKIHEILMENGCIVRMKKIPIRRVKREEVLLVHSELHWNSVLKLQSLTPQDIVNS
EQYYNDLSLYVHVETPNSARLSCGGVIEAALAVARNELKKSFAIVRPPGHHAEPDKAMGF
CFFNNVAVAAKVVQQMTPIKRILILDWDVHHGNGTQRAFNDDPSVLYISLHRYDGGQFYP
CGSFGSLVSCGEGAGLGYSVNIPWPEKGMRDADYIHAFQKIVMPIALEFAPELVIISAGF
DAADGDELGQCHVTPAGYAHMTHMLSGLAGGRLVVALEGGYNLESISASALAVGRTILGE
SPPEMPPLVASENATETVWQVAMEQSKYWKNIDPKACEPREDIEEITFSIPELLKAHRQE
YMYRQFDMLEVPLMDDEHQERFSSQVMCSADLMDNDVLVIFAHEFGNLRVELANSATCDL
RMEHGYLIDVSKQIVEWVRQEGYALLDVNLFPKPPLLRQHPYAPKSSEEYAREVMVYLWD
NYVMLSNAKRIILLGHGPGVIAVSELLDHRTTAVQRYVQLVIQIVGYAKIPLIPRKDTEV
TSWYGKHSLVIVPEDHQIFRASKKILQRHGKVVQIGK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagacgtccgaccagtaacagataacgcggctgtctctcgaggggcctcggaa
gaagggagagcttcatctgttcctgttcccgccagtgacctcgccgtcggctttgtctac
gcgccagagatgctattacatagctttgaaagtagtgaccctgaagccgatcatccggaa
cgaccagagcgtatagccaagattcacgagatccttatggagaacgggtgcatcgtgagg
atgaagaagattccgatacgacgcgtgaaacgcgaggaagtacttctcgtccacagcgag
ctgcattggaattccgtgcttaagcttcaatcactcactcctcaagatatcgttaattcc
gaacaatattacaatgatctctcgctttatgtccatgtagaaactccgaacagtgcccga
ctaagctgtggtggcgttattgaagcagctcttgcagttgcgcgaaatgagctcaagaaa
tctttcgccattgtgcgcccgcctggtcatcacgctgaaccagataaagccatgggcttc
tgcttctttaataatgtcgctgttgcggctaaagttgtgcaacagatgactcccatcaag
aggatattgatccttgactgggacgtccaccacggcaacgggacacagcgggcattcaat
gatgacccgtcggtgctttacatctcgcttcatcggtacgatggcggccaattctatcct
tgcgggtcattcggcagccttgtatcctgcggtgaaggggcagggcttggctactccgtc
aacattccttggccggagaaagggatgcgggacgcagactatatacacgcctttcaaaag
atcgtgatgcccatcgctttggaatttgctccagagcttgtaatcatttctgctggtttc
gatgctgccgacggggatgaacttggccagtgtcatgttacgcccgcaggatatgcgcac
atgacccacatgttgtctggactggcaggtggtcgtttggtagtcgcgcttgagggaggc
tataatctagagtcaatatcagcttctgcgctggcggtgggtcggacaattcttggggag
tcgccccccgagatgccgccactagtagcgtcagaaaacgccacggagacagtttggcag
gtggccatggagcaaagcaagtactggaaaaatatcgacccaaaagcttgcgagccgcgc
gaagatatcgaggagatcacattttccattccggaactgttgaaagcccatcgtcaagag
tacatgtaccgacagttcgatatgcttgaggttcctttgatggacgacgaacatcaagaa
cggttctcgtcccaagtaatgtgttctgcagacttgatggacaatgatgtccttgtgatc
tttgcccacgaattcggcaaccttcgagtggagttggcgaacagtgctacatgtgatctt
cgtatggagcatggatatctgatcgatgtttcaaagcagattgttgaatgggtacgacag
gaaggctacgccctcttggacgtcaatctcttcccaaaacctcccttacttcggcagcat
ccgtatgccccaaaatcatctgaggagtatgccagagaagtcatggtttatctatgggac
aactatgtcatgttgtcgaatgccaagaggataatactgctaggtcatgggcctggtgtc
atcgccgtgtccgaacttcttgatcatcgaacaacggccgtccaaagatatgtacagttg
gtcatccagattgtaggatacgccaaaatcccgttgattcctagaaaagacaccgaggtg
acttcttggtacggaaagcactctctcgtaatcgtcccggaagaccatcaaatattccgc
gcaagcaagaaaattcttcagcggcacggaaaagttgtccaaataggtaagtag
DBGET
integrated database retrieval system
