Hydra vulgaris (swiftwater hydra): 100214986
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Entry
100214986 CDS
T01080
Name
(RefSeq) histone deacetylase 5
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100214986
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100214986
04131 Membrane trafficking [BR:
hmg04131
]
100214986
03036 Chromosome and associated proteins [BR:
hmg03036
]
100214986
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100214986
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100214986
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100214986
Membrane trafficking [BR:
hmg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100214986
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100214986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100214986
NCBI-ProteinID:
XP_002162568
UniProt:
A0A8B6XNA4
LinkDB
All DBs
Position
7:complement(53707084..53708353)
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AA seq
367 aa
AA seq
DB search
MTSRKVGIVYDEAFQQHQHPRGLSRGFMHPEIPDRVSAPYAYLKKKDVLDKLVHIKSRPA
TISELTLVHDEEYVNRLKNAKITDHESIFAKFDIIKDIKVENLQFEDDKWDSYIHEKTYE
TALLSAGSALQLTEAVLNNVIDSGFALIRPPGHHAEACYAAGFCYFNNVAIAARYAQLQG
AKKILIVDWDIHHGNGIQDMFYDDDSVLYISLHRYYTYPDLEKAKAEYIGEKKGLGFNIN
IAWDETPMGECEYKLAFEEVVLPVARKFAPDLILVSCGFDAARGDPLGEFDVSINTYSWM
TTRLLEISKTALFLEGGYNNENLCNGVYAVIMSLLGEYEPDEIVGTANLVGQQNIETTKN
AIKDYWF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacctctagaaaagttggtattgtttatgatgaagcatttcaacagcaccagcatcct
cgtggcctatcacgtggatttatgcatcctgaaatacctgatcgagtatctgcgccatat
gcatatttaaaaaagaaggatgtacttgataaacttgttcatattaaatcaagacctgca
actatcagtgaacttacattagttcacgatgaagagtatgttaataggcttaaaaatgca
aaaattactgatcatgaaagtatttttgcaaaatttgatataataaaagatattaaagta
gaaaatttacaatttgaagatgacaaatgggatagttatattcacgaaaaaacttatgaa
actgctttattatcagctggttctgctttgcaacttacagaagctgttttaaataatgtt
attgatagtggttttgcattaataagacccccaggccatcatgctgaagcttgctatgct
gccggtttttgttattttaacaatgttgctatcgctgctcgatatgcacagttgcaaggt
gctaaaaaaattttgattgttgattgggacattcaccatggcaatggaatccaagatatg
ttttatgatgatgatagtgttttgtatatttcattgcatcgatattacacttatcctgat
ttggaaaaagcaaaagcagaatacataggagaaaaaaaaggccttggatttaatattaac
attgcttgggatgagacaccaatgggtgagtgtgagtataaacttgcatttgaagaagtt
gttctaccagttgcacgaaagtttgcaccagatttgatcttggtgtcgtgtggatttgat
gctgcacgaggcgacccacttggtgaatttgatgtatcaatcaatacttattcctggatg
acaactcgtctgcttgaaatatctaaaactgccctgtttttagaaggaggttataataat
gagaatctctgcaatggagtttatgctgttattatgtcactcttgggtgaatatgaacct
gatgaaattgttggcacagcaaatctagtaggtcaacaaaatattgaaacaactaaaaat
gcgattaaagactattggttttaa
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integrated database retrieval system