Hydra vulgaris (swiftwater hydra): 101234293
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Entry
101234293 CDS
T01080
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101234293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
101234293
04121 Ubiquitin system [BR:
hmg04121
]
101234293
03036 Chromosome and associated proteins [BR:
hmg03036
]
101234293
03400 DNA repair and recombination proteins [BR:
hmg03400
]
101234293
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101234293
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
101234293
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101234293
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101234293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_6
PTCB-BRCT
RTT107_BRCT_5
zf-C3HC4_2
zf-RING_10
zf-C3HC4
zf-RING_5
zf-C3HC4_3
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
101234293
NCBI-ProteinID:
XP_012557248
UniProt:
A0A8B7DGQ7
LinkDB
All DBs
Position
7:complement(15011160..15060484)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSNDVDWSLTKEYLNVLMNLLTCSYCHNRLKEPCNFKMCDHYFCKNCAIILNNENAEC
PECKIALWKENLQLNLKIPDVLAICDEINSLITKGKNAYVQAENENEFLLEDKKILSNCV
KTSKQENDGHNLEVTSAHNVFKNDETKTKKRSSRNSKTKTSIRNATSVTKNIEDDRRKEN
ESLLEINIPLAFSNNKNQNSTIEKNCFDNEDNVQKIEDHNKEISYQNEKSHIKSDRTDIL
WHISKKPKITYSKRVNLLKNSSSSTTKPFYTDNNEEYSIFDFKDDISSTPVNLNSKHLPD
TKKKDTTKPQKPQEMNSNKLPNQSALNRNSKNNQKQKPLATANKSLTKRNNKGETSLHTA
CIKGNLQKARDLLQLGADPNTKDNAGWTPLHEACNHGTVDIVKLLLSYGAILDMVAGDDH
DTPLHDAVANNQVDVVKLLLKHAAPTHKRNRLGKLPIDYATTEEMKELFKDDSLVVDKSY
VEGNSFLVNDLVSPKVFVTTNLSEKENSNVSICCEQLGAKLQKDFNITVTHVICGADKSF
LSISRTMKYLLGLITGKWLVSYQWIMDSLAKKNWQNENDYEVKGIPGASDNIPMKSRINR
LKYLPGLFEGCSFYFSGAYSVLSKDKLSELVKYGGGKILLREPKANDLTSIIPSSSRRKI
DILPKNLSPVMIFHAKENSSQACCTEYIIYDPKMSPKHKKMYSPLLCSAPVSWLLDCVSC
FEILDVRDDDQKN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctaatgatgttgactggtctttgacaaaagagtatttaaatgttttaatg
aatttgcttacatgttcttactgtcacaacaggttgaaagaaccatgcaacttcaaaatg
tgtgatcattatttttgcaaaaattgtgctataatccttaacaatgaaaatgcagaatgc
ccagaatgcaaaattgcactttggaaagaaaacttacagttaaatttaaaaattcctgat
gttttagctatatgtgacgagattaatagtttaattactaaaggtaaaaatgcttatgtg
caagctgaaaatgaaaatgaatttcttcttgaagataaaaagattttaagcaattgtgtt
aaaacaagtaaacaagaaaacgacggccataaccttgaagttacttctgctcacaatgtt
ttcaagaatgatgagacaaagacaaaaaaaagatcatcaagaaatagcaaaacaaaaact
tctataaggaatgcaacttctgtaactaaaaatatagaagatgacagaagaaaagaaaat
gaatcattattagaaattaatattccattggctttttctaataataaaaatcaaaattca
actattgaaaaaaattgttttgataatgaagacaatgttcagaaaattgaagatcataat
aaagaaattagttatcaaaacgaaaaatctcatattaaaagtgatcgtactgatatactc
tggcacatttcaaaaaagcccaaaataacttacagcaaaagagttaatttgttgaagaat
agttcttcatcaactacaaaacctttttacactgataataatgaagagtattcaatattt
gattttaaagatgatatttcttcaactcctgtaaatttgaattcaaaacatttaccagat
acaaaaaaaaaagacacaacaaagccacaaaaacctcaagaaatgaattcaaacaagtta
ccgaaccaatctgctttgaaccgaaacagcaaaaataatcaaaaacaaaaaccattagct
acagcaaacaaaagtttaacaaaaagaaataacaaaggagagacatcacttcatacagct
tgcataaagggtaatctacaaaaagcaagagatcttttacaacttggtgctgatcctaac
actaaagataatgcaggatggactccacttcatgaagcttgcaatcatgggactgttgat
attgttaaactgttgctttcttatggtgccattcttgatatggttgctggtgatgatcat
gatacaccattacatgatgcagttgcaaataatcaagttgatgtggttaagttattgtta
aaacatgcggccccaacacataaaagaaatcgtcttggaaagcttccaatagattatgct
accactgaggaaatgaaagaactgttcaaagacgattctttggttgttgataaatcatat
gttgagggaaactcttttcttgtaaatgatctagtatcaccaaaagtttttgttactact
aatctttcagaaaaagaaaactctaatgtatccatttgctgtgaacaacttggtgcaaag
ctacaaaaggattttaacataactgtaactcatgtaatatgtggagcagacaaatctttt
ttgagcatttcaagaacaatgaaatatttgctgggtcttataacaggaaaatggctagtt
agttaccaatggataatggacagtcttgcaaaaaaaaattggcagaacgaaaacgattat
gaagtaaaagggattcctggagcttcagataatattccaatgaaatctcgaataaatcgt
ttaaaatatcttcccggtttgtttgaaggttgttcgttttatttctctggagcttacagc
gttctctctaaagataagctctctgaattagtaaaatatggtggcggaaagatattgctg
agagagcccaaagcaaatgacttgacttcgattatacctagttcttctcggcgtaaaata
gacatccttccaaaaaatctttcacctgtgatgatttttcacgcaaaagagaattcctct
caagcatgttgcactgagtacattatatacgacccgaagatgtcaccaaaacacaaaaaa
atgtatagccctttactttgttcggcaccagtttcctggttattagattgtgtatcttgt
tttgagattttagacgttcgcgatgatgatcaaaaaaactaa
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