Hemiscyllium ocellatum (epaulette shark): 132817594
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Entry
132817594 CDS
T09720
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132817594 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132817594 (bard1)
04121 Ubiquitin system [BR:
hoc04121
]
132817594 (bard1)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132817594 (bard1)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132817594 (bard1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
132817594 (bard1)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
132817594 (bard1)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132817594 (bard1)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
132817594 (bard1)
BRITE hierarchy
Motif
Pfam:
Ank_4
Ank_2
Ank
zf-RING_6
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4
zf-RING_10
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
132817594
NCBI-ProteinID:
XP_060684081
LinkDB
All DBs
Position
7:108361727..108538431
Genome browser
AA seq
789 aa
AA seq
DB search
MSGPHRGQSWAHTAGALAALEGLLQCSACCKLLQEPVCLGGCEHVFCRVCVADSLGTNCP
VCHTPTWVKDLQPNRQLHNIADLCSQLRVLLNVRDSPGAKCNLTGSVIRPENVTGKKWEM
RTWFSPRSRKMRCVLDMNASRKNQKVASSSGFNGSSSSVFEFMSSPSPPLNSPKKKAPVN
SKQRVRKRLADANKGWGFGKRRSKKMERGNDSPENIDYHRVVSFCSQSVVLSSQGQTVAG
ETAEESLAVPQDDNVIDSSAESLTKNVIENSSEACCTPTVSSCKNISLGQTFNQGGDIFS
LVPIPATHTNAKRSRKSSDSRNLTLAKKSRKEVQNSCFEKSSAIVCEQAKLDTQQEFSAT
PARQTELSGSINQTQAPSSTENNCGTPSSRYNAQGKQCATPKSPQTPQATFRSQLPGSCA
MTPISPVTPTMKRNHKGETPLHIAAIKGDIAAVEQLLENGANPNIKDNAGWTPLHEACNH
GHLEIVERLLKFGVLLNTPGYQNDSPLHDAVRNGHVDVVKLLILHRASQDVINIFGLRPV
DYANSEEMIAALHHSPKNEDPVAEHCFAVTSNQRRDGPIVLLGSDLLGAKKKKLDKLVKL
LKAGNCTEFNTSVTHIIVPNDQALSTMKCLMGIVSGCWLVNFEWVTACLEKNDRVAEEDY
EINIVNGPERGRRNQEQQLPKLFDGCHFYFMGPFKSCKKEDLVNLVKVGGGQVLARQPKP
DSDVTQSINTVAYHASPGSDQSFCTQYIISDKDSNYKPERVRLGKVWTTHCTWLIDCVKA
FELLPITEH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggccacatcgcggacagagttgggctcacacagcgggggccctggccgcactc
gaggggctgctgcagtgctcggcctgttgcaaactgctgcaggagcctgtctgtcttgga
ggctgtgagcatgtattttgccgagtttgtgttgctgattctcttgggacaaattgtcca
gtgtgtcacactccaacctgggtaaaagacctgcagccgaacagacagctgcacaatatt
gccgacctgtgcagccagcttagagttctcctgaatgtcagagactctccaggtgccaaa
tgcaatctaactggatcagtaatcagacctgaaaatgtaactggtaaaaaatgggaaatg
agaacatggttcagtccacgcagtagaaaaatgaggtgtgtgctagatatgaatgcttcc
aggaagaatcagaaagtggcttccagttctggttttaatgggtcatcatcatctgtgttt
gaattcatgtcatcaccatctcctccactcaactctccaaagaagaaagctccggttaac
tcaaaacagagagtaaggaaaagattagctgatgccaataaaggttggggttttggaaag
agaagaagcaagaaaatggagagaggaaatgacagccctgaaaatatagattatcataga
gttgtctcattttgcagccaatcggtggtcctcagcagccaggggcaaacagttgcaggt
gagacagctgaagagtcacttgctgtgccacaggatgacaatgtaattgactccagtgca
gaatctttgaccaagaatgtgattgagaattcttctgaagcatgctgtactccaacagtc
tccagttgcaaaaatatttcccttggacaaactttcaatcagggaggagacattttttct
cttgtccccatcccagccacacacacaaatgctaaaagatcaaggaaatcatcagattca
cgcaacctgactcttgccaaaaagagcagaaaagaagtacagaattcttgctttgaaaag
tcatctgcaattgtttgtgagcaagctaagttagacacacaacaggaattttcagctact
ccagcacgtcaaactgagttaagcgggagcattaatcagacgcaagccccttcttcaaca
gaaaataactgtggtacaccatctagcagatacaatgctcaaggaaagcaatgtgcaacc
ccaaaatctcctcaaacaccacaagctacatttagaagccagttacctggaagttgtgca
atgactccaatctcacctgttactcccacaatgaaaagaaatcacaagggtgagactcca
cttcacatcgctgccataaagggtgatattgcagcagtggagcagcttttggagaacgga
gcgaatccaaacatcaaagataatgctggatggaccccattgcatgaggcatgcaaccat
ggacacttggaaattgtagagcggctgctgaaatttggcgtgctactgaatacaccagga
taccagaacgattctcccttgcatgatgctgtcaggaatggacacgtggatgttgtaaag
ctgctgatcttacaccgtgcctctcaggatgtgatcaatatctttgggctgcggcctgtt
gattatgcaaattcagaagaaatgatagctgctttacatcactcccccaaaaatgaggat
ccagttgctgagcactgctttgcagtgacttcaaaccagagaagagatggacctattgtg
ttactgggaagtgatctccttggagccaagaagaaaaaacttgacaaattagtaaagctg
ttgaaagctgggaactgcactgaatttaatacctcggtgacgcacattattgttcccaat
gatcaggctctctctaccatgaagtgtttgatggggatcgtctctggctgctggcttgtg
aattttgaatgggtgacagcttgcctggagaagaatgacagagtagctgaagaagactat
gagataaatattgtaaatggtcccgaacgtgggcgacggaaccaggagcagcagctacca
aaactatttgatggctgccacttctatttcatgggcccattcaaaagctgcaagaaggaa
gatcttgttaatttggtcaaggttggtggggggcaggtccttgcccggcagccaaaacca
gacagcgacgtgactcagagcatcaacactgtggcttaccatgcatcccctggctcggat
cagtcgttttgtacacagtatatcatctctgacaaagacagtaactataagcctgaaaga
gtgaggttaggtaaagtgtggaccacccattgtacatggctgattgactgcgtgaaagca
tttgaactgctgccgataaccgaacactaa
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