Haliotis rubra (blacklip abalone): 124261800
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Entry
124261800 CDS
T07967
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124261800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124261800
04121 Ubiquitin system [BR:
hrj04121
]
124261800
03036 Chromosome and associated proteins [BR:
hrj03036
]
124261800
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124261800
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124261800
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
124261800
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124261800
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124261800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
zf-RING_6
BRCT
Ank_3
BRCT_2
zf-RING_5
RTT107_BRCT_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
124261800
NCBI-ProteinID:
XP_046552121
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MNIAIRVTIQVCSTAKHDKPCSICTTTTSVWIDGNYTNCISTSGNIYQLSPNKCPVSNAI
VYITRASNSASLLWDLILGRMTFINKLSKPDHVDPMSRLITKSKKLHPTLCTLGACDHLF
CRDCCTSFLGAVCPACQIPAHVKDAQVNRQLSNLVSLCKELGRILTCNQDKTGSGTIAQD
ADQSIQDLQESTPQSWQLKLLSNTTATVSVNKVKVTGRGDQTLSDETGSHVGRSLRRKKQ
TSKPTRLRQSVETEQRDDDGTRETRSGRSRSRRGQRKTQDAPVEDGDSGGKTMDGGAEGK
VENSRSVSRNRRGDRNESEKKLRGVPPSEQTTLTHLYDEAVDESGGSTLAGETGRGRKRG
RPRKGVHTPVREGSRSSSRQTKVKPADQSTMTQFYDYDDEELPLLDMDDDTDSNVTTNSN
PGKSGPARKASKESRNGRGRPHKQTSNPSSPSSFGTPESGETGQSADQRKRGRKCVKSKE
KTSPVFQQSPRKKGKRDLDSSLVESNTGHSRLNARGETQLHVAAIKGDVDRVMTLLESGA
GPNVRDNAGWTPLHECCNHGHAAIAEMLLNHGAMINIPGMDNDTPLHDAVDNYRLDVVKL
LVSRGASITTRNMKGQTPLDLAQTDEMRQALNTPVSAGPSQTDVPMTPCEQEYLPLCFLG
TALSRDQGRTLHKCASLLHAKVVGRFVPEVTHVITSCNRQGQCPRTLKFLNAVLGGKWIL
SVEWLDLCLEYKQKVCEEAFEVPGPSTKPDSHAATKGRLNRRQQLPGLFDGCQFYFYGSF
HEPTPHKEDLQTLVKSAGGKIISREPKLQNIDDYDQTVPYHAESTSALKDCSVFIIHDKR
VSYPAINLSRMCVLPANWIMDSIASFRLCDPAVM
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgctatcagggtcactatccaagtgtgttctacagctaagcatgataagcca
tgctcaatatgtacaacaactactagtgtttggatcgacggaaattacacaaattgtatc
agtacatctggtaacatttatcagttgtcaccgaacaaatgtccagtaagcaatgctatc
gtctatatcaccagagcctcgaattcagctagcttgctttgggatctaatattgggcagg
atgacgttcattaacaaactcagcaagcctgaccatgttgatcctatgagtcgcctcata
actaagagcaaaaaactgcatcctaccctgtgtactctaggtgcttgcgatcatttgttt
tgtcgcgattgttgcacatccttcctgggtgcagtttgtcctgcctgtcagatacctgcc
catgtgaaggatgcacaggtgaacaggcagctgtccaacctcgtcagcctctgtaaggag
ctggggcggattctcacctgtaatcaagacaagaccggaagtggtaccattgcacaggat
gcagaccagtcaattcaagatctgcaagagagcactccacagtcttggcagttgaagctg
ttgtccaacacaacagccacagtatctgtcaacaaggtcaaggtcacaggtcggggggat
cagactctaagtgatgaaacaggatctcatgtcgggaggagcctgagaagaaagaaacag
acgtccaaaccaaccagattgcgacagtccgtggaaacagaacagagggatgatgacgga
accagagagaccaggtcaggtcgcagcaggtcaaggagaggtcaaaggaagacacaagat
gcacctgtggaagatggggatagtggagggaagacgatggatggaggtgctgaagggaag
gtggagaactcccggagtgtctccagaaacagacgtggagataggaatgagtctgaaaag
aagctgagaggcgttccaccttcagagcagacgaccttgacccatttgtatgatgaagct
gtggatgaaagtggaggctctactcttgctggagagacagggcgtggccggaaaagagga
cggccaaggaagggtgtccatacaccggttagagaaggcagcagaagcagcagcagacag
acaaaggttaaaccagcagatcagtcaacaatgactcagttctatgactatgatgacgaa
gaactgccacttttagacatggatgatgatactgacagtaatgttacaaccaacagtaac
ccaggaaaatcaggtccagccagaaaagcatccaaggaatcaagaaatggacgtggaaga
cctcataaacagacctctaacccaagctcaccatccagtttcggaacgccagagtcagga
gagactggtcagtctgcagatcagaggaagaggggaaggaagtgtgtgaagagcaaggag
aagacctcacccgtgtttcagcagagtccaaggaagaaagggaagagggacctggattct
agcttagtggagtcaaacacaggacactccaggctcaatgctcgtggggagactcaacta
catgtggcagccattaagggtgatgtggacagagtgatgacattgctggaatctggtgca
ggtcccaacgtccgtgacaacgcaggctggactccactgcatgaatgttgtaaccatggc
catgctgccatagctgagatgttgttgaaccacggcgccatgatcaacatcccaggcatg
gacaacgacacccctttacacgacgctgttgacaactacagactggatgtggtgaagctg
ctggtgtccagaggagcttccattactaccagaaacatgaaggggcagaccccactggac
ttggcccaaactgatgagatgaggcaggccctgaacacacctgtgtccgctggaccaagc
cagactgatgttcctatgactccgtgtgaacaggaatacttgccactctgcttcctgggt
acagcgctgtcgcgggatcagggcaggactcttcacaaatgtgcatctctgctccatgct
aaggtcgtgggtcggtttgtccccgaagtgacccatgtgatcacgtcatgtaatcggcaa
ggccagtgtccccgtacactcaagtttctgaatgctgtgcttggtggcaagtggatcctg
tcagtagagtggctggacctgtgtctagaatacaagcagaaggtgtgtgaggaggccttt
gaggtcccggggcccagcactaagcccgactcccacgccgcaaccaagggcaggctgaac
aggaggcagcagctgcctggtttatttgatggctgccagttctacttctatggaagtttc
cacgagcccactcctcacaaggaggacctccagaccctggtcaagagtgctggcgggaag
atcatctcacgagaacccaagctgcagaatatcgatgactacgaccaaactgttccctac
cacgctgagtccaccagtgccctgaaggactgcagtgtgtttatcattcatgacaagaga
gtgtcgtaccctgccatcaacttgtctcggatgtgtgtgctacccgccaactggataatg
gactccattgcttctttccgactctgtgatccagcagtcatgtga
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