Haliotis rubra (blacklip abalone): 124291667
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Entry
124291667 CDS
T07967
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124291667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124291667
Enzymes [BR:
hrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124291667
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
124291667
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
124291667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
Cdd1
HHH
HHH_3
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
124291667
NCBI-ProteinID:
XP_046584672
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MLACRRLWGLGSHSTNISKLRLFLQATIMSKRKGPESGNLNAEFSDFLMELANYEKNVNR
AMHKYNAYRKAAGAIAKHTSRITSGAEAKKLDGVGIQIAKKIDEFIATGKLQKLEKIRAS
DTNTAINELTKVNGIGPAAAQKFVQEGIMSVEDLRKNLDKLNNSQKIGVKHFEDFEKRIP
REEMVILQNTSVGEIKKLDSEYTAKVCGSFRRGAASSGDIDILLTHPSYISGSKKMPDLL
HKVVKCLEAINFVTDTISLGDSKFMGVCIKPKEKDDTEERSFRRIDIRLIPHDQYFCALL
YFTGSDVFNKNIRQHALDDGFTLNEYCIRPVGSTGTPGEPLPVTCEEDVFDYVGMKYKVP
KDRNM
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcttgtcggcgtttgtggggtttaggaagccactctactaacatcagcaaattg
cgactatttctgcaagcaacaataatgagtaaacgaaaaggacctgaatcgggaaacctt
aatgctgaattttcggactttttaatggaacttgctaactatgagaagaatgtgaaccga
gccatgcacaagtacaatgcataccggaaggcagcaggtgccattgcaaaacatacttca
aggataacaagtggagctgaggccaagaaactggatggagttggaattcagattgccaag
aagattgatgaatttattgcaacaggcaaactccaaaagcttgaaaagattcgtgccagt
gacacaaatacagccattaatgaactgacaaaggtcaacggcatcggacctgctgcagca
cagaagtttgtacaggaaggaatcatgtcagttgaagatctgagaaaaaatttggacaaa
ctgaataattcacagaaaataggagtgaagcattttgaagattttgaaaagagaattccc
cgagaagagatggtgatactacagaatacttctgttggggagatcaagaaacttgacagc
gaatacacagctaaagtgtgtggcagcttcagaagaggtgctgcctctagtggggatata
gatattctcctcactcaccccagctatatcagtggcagtaaaaaaatgcctgacctgctg
cataaagttgtgaaatgtttggaggccatcaactttgtaactgataccatctccctgggg
gattcaaagttcatgggtgtctgtatcaaacccaaggaaaaagatgatacagaggagagg
agcttcagaagaatagatatcaggttgataccccatgaccagtacttctgtgccttgctg
tacttcaccggctctgatgtcttcaacaagaacataagacaacatgcgctggacgatggc
ttcacgctcaatgagtactgtatacgccctgtaggcagcacgggcacgcctggtgaacca
cttcctgtaacatgtgaagaagacgtctttgactatgtgggcatgaaatacaaggttccc
aaggacaggaacatgtag
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