Helobdella robusta: HELRODRAFT_184959
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Entry
HELRODRAFT_184959 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
hro
Helobdella robusta
Pathway
hro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HELRODRAFT_184959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_184959
Enzymes [BR:
hro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HELRODRAFT_184959
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
HELRODRAFT_184959
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
HELRODRAFT_184959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH
HHH_2
HHH_3
Cdd1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
20209923
NCBI-ProteinID:
XP_009019343
JGI:
Helro1_184959
UniProt:
T1FM74
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MSKRKSISDSSMPNKDIVDFLLELANYEKNVTRQVHKYNAYRKAAGSVSKHTAPITSGKQ
AKALDGVGEKIAKKIDEFLATGKLEKLEKIRKDEMSTSIAELTKVTGIGPVAARKFFDKG
IKSIEDLKKHVDQLNHHQKIGLKYFEELDKRIPRNEMLELEKVIKEEVNGVDALYIAEIC
GSFRRGAEMSGDVDVLLTHPSFTSQSKQHAALLQAVVERLRSVTFITDTLSLGDTKFMGI
CKLTDDDDDDDGGKKHGHRRLDIRLIPHDQYPCALLYFTGSDVFNKNMRTLALSKGFTIN
EYCIRPLGTTGVPGEPLDVTCEKDIFDYIGMEFKEPPERND
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaagtcaatttctgactccagcatgccaaataaagacattgttgacttt
ttactggaacttgcaaattatgagaagaatgtgacaaggcaggtgcataaatacaatgca
tacaggaaagctgctggctccgtatcgaaacacactgctccaatcacaagtggcaagcaa
gcgaaggcactggatggagttggtgagaagatagcaaagaaaatagatgagtttcttgct
accggcaagcttgaaaaattagaaaaaataagaaaagatgagatgagcacgtccattgct
gagcttaccaaagttactgggatcgggcctgttgctgccaggaaattttttgacaaagga
atcaaatccatcgaagatctcaagaaacatgttgatcaactgaatcatcaccaaaaaatt
ggactgaaatattttgaggagttggacaagaggattccaagaaatgaaatgctggaactt
gagaaagtcataaaggaagaagtgaatggagtggatgccctgtacatagctgaaatatgc
ggaagtttcagaaggggagccgagatgagcggtgatgtcgatgttctcctaacccaccct
tcgttcacctcacagtccaagcaacatgctgcattgctccaggcagtggtcgagcggttg
aggtcagtcacattcattaccgatactttatctttgggagacaccaagtttatgggtata
tgcaaactgactgacgacgatgatgatgatgacggtggcaagaagcacggccatcgcaga
ttggatataagattgatacctcacgaccaatacccatgcgctctcctctacttcactggt
agtgacgtattcaacaagaacatgcgtacactggctctcagcaagggtttcaccatcaac
gaatactgcatcagacccctcggaactactggtgtgccaggtgaaccactggatgtaacg
tgcgagaaagatattttcgattacattggaatggaattcaaggagccgccagaaaggaat
gattaa
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integrated database retrieval system
