Homo sapiens (human): 9978
Help
Entry
9978 CDS
T01001
Symbol
RBX1, BA554C12.1, RNF75, ROC1
Name
(RefSeq) ring-box 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03420
Nucleotide excision repair
hsa04066
HIF-1 signaling pathway
hsa04110
Cell cycle
hsa04114
Oocyte meiosis
hsa04120
Ubiquitin mediated proteolysis
hsa04141
Protein processing in endoplasmic reticulum
hsa04310
Wnt signaling pathway
hsa04350
TGF-beta signaling pathway
hsa04710
Circadian rhythm
hsa05131
Shigellosis
hsa05170
Human immunodeficiency virus 1 infection
hsa05200
Pathways in cancer
hsa05211
Renal cell carcinoma
Network
nt06165
Epstein-Barr virus (EBV)
nt06166
Human papillomavirus (HPV)
nt06182
Shigella
nt06225
HIF-1 signaling (cancer)
nt06230
Cell cycle (cancer)
nt06261
Gastric cancer
nt06264
Renal cell carcinoma
nt06267
Small cell lung cancer
nt06272
Prostate cancer
nt06502
Nucleotide excision repair
nt06509
DNA replication
nt06516
TNF signaling
Element
N00080
Loss of VHL to HIF-1 signaling pathway
N00081
Mutation-inactivated VHL to HIF-1 signaling pathway
N00091
p27-Cell cycle G1/S
N00092
Amplified MYC to p27-cell cycle G1/S
N00942
Shigella OspG to TNF-NFKB signaling pathway
N01425
Global genome NER
N01430
Transcription-coupled NER
N01473
DNA replication termination
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9978 (RBX1)
04120 Ubiquitin mediated proteolysis
9978 (RBX1)
09124 Replication and repair
03420 Nucleotide excision repair
9978 (RBX1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
9978 (RBX1)
04350 TGF-beta signaling pathway
9978 (RBX1)
04066 HIF-1 signaling pathway
9978 (RBX1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
9978 (RBX1)
04114 Oocyte meiosis
9978 (RBX1)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
9978 (RBX1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
9978 (RBX1)
09162 Cancer: specific types
05211 Renal cell carcinoma
9978 (RBX1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
9978 (RBX1)
09171 Infectious disease: bacterial
05131 Shigellosis
9978 (RBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
9978 (RBX1)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
9978 (RBX1)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
9978 (RBX1)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
9978 (RBX1)
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
9978 (RBX1)
Cul2 complex
9978 (RBX1)
Cul3 complex
9978 (RBX1)
Cul4 complex
9978 (RBX1)
Cul7 complex
9978 (RBX1)
Cul8 complex
9978 (RBX1)
Cul9 complex
9978 (RBX1)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
9978 (RBX1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
9978 (RBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
9978
NCBI-ProteinID:
NP_055063
OMIM:
603814
HGNC:
9928
Ensembl:
ENSG00000100387
UniProt:
P62877
Structure
PDB
LinkDB
All DBs
Position
22:40951378..40973309
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagaatgtcaagctaaccag
gcgtccgctacttcagaagagtgtactgtcgcatggggagtctgtaaccatgcttttcac
ttccactgcatctctcgctggctcaaaacacgacaggtgtgtccattggacaacagagag
tgggaattccaaaagtatgggcactag
Homo sapiens (human): 8451
Help
Entry
8451 CDS
T01001
Symbol
CUL4A
Name
(RefSeq) cullin 4A
KO
K10609
cullin 4
Organism
hsa
Homo sapiens (human)
Pathway
hsa03420
Nucleotide excision repair
hsa04120
Ubiquitin mediated proteolysis
hsa05170
Human immunodeficiency virus 1 infection
Network
nt06161
Human immunodeficiency virus 1 (HIV-1)
nt06502
Nucleotide excision repair
Element
N00456
HIV Vpr to CDC25-cell cycle G2M
N01425
Global genome NER
N01430
Transcription-coupled NER
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8451 (CUL4A)
09124 Replication and repair
03420 Nucleotide excision repair
8451 (CUL4A)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
8451 (CUL4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
8451 (CUL4A)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
8451 (CUL4A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsa04147
]
8451 (CUL4A)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
8451 (CUL4A)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
8451 (CUL4A)
TCR (transcription coupled repair) factors
Cul4-CSA complex
8451 (CUL4A)
Exosome [BR:
hsa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8451 (CUL4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
8451
NCBI-ProteinID:
NP_001008895
OMIM:
603137
HGNC:
2554
Ensembl:
ENSG00000139842
UniProt:
Q13619
Structure
PDB
LinkDB
All DBs
Position
13:113208193..113267108
Genome browser
AA seq
759 aa
AA seq
DB search
MADEAPRKGSFSALVGRTNGLTKPAALAAAPAKPGGAGGSKKLVIKNFRDRPRLPDNYTQ
DTWRKLHEAVRAVQSSTSIRYNLEELYQAVENLCSHKVSPMLYKQLRQACEDHVQAQILP
FREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRT
HIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQVYKDSFELKFLEETN
CLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLT
AILQKGLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGTAIVINPEKDKD
MVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINKRPNKPAELIAKHVDSKLRAG
NKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK
HECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSDSGPIDLTVNILTMGYWPTYTPME
VHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLL
MFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEF
KHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELY
NQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggccccgcggaagggcagcttctcggcgctcgtgggccgcaccaacggc
ctcaccaagcccgcggccctggccgccgcgcccgccaagccggggggcgcgggcggctcc
aagaagctggtcatcaagaacttccgagacagacctcggctgcccgacaactacacgcag
gacacgtggcggaagctgcacgaggcggtgcgggccgtgcagagcagcacctccatcagg
tacaacctcgaggagctctaccaggctgtggaaaatctctgttctcacaaagtctcccca
atgctctacaagcaactgcgtcaggcctgtgaagaccacgtccaggcacagatccttccg
tttagagaagactcactagatagtgttttatttttaaagaagattaacacgtgctggcag
gaccactgcagacaaatgatcatgatcagaagcatcttcctgttcttggaccgcacctat
gtgctgcagaactccacgctgccctccatctgggatatgggattagaactgtttagaacc
catattattagtgataaaatggttcagagtaaaaccattgatggaatcctactgctgatc
gagcgcgagaggagcggcgaggccgtggaccggagcctgttgcggagcctcctgggcatg
ctgtctgacctgcaggtgtataaagattcatttgaactgaaatttttggaagagactaat
tgcttatatgctgccgaaggccaaaggttaatgcaggaaagagaggttccagaatatctt
aaccatgtaagtaaacgcttagaggaagagggagacagagtaatcacttacttggaccac
agcacacagaaaccactgattgcttgtgtggagaaacagctattaggagaacatttaaca
gcaattctgcagaaagggctcgaccacttactggatgagaacagagtgccggacctcgca
cagatgtaccagctgttcagccgggtgaggggcgggcagcaggcgctgctgcagcactgg
agcgagtacatcaagacttttggaacagcgatcgtaatcaatcctgagaaagacaaagac
atggtccaagacctgttggacttcaaggacaaggtggaccacgtgatcgaggtctgcttc
cagaagaatgagcggttcgtcaacctgatgaaggagtcctttgagacgttcatcaacaag
agacccaacaagcctgcagaactgatcgcaaagcatgtggattcaaagttaagagcaggc
aacaaagaagccacagacgaggagctggagcggacgttggacaagatcatgatcctgttc
aggtttatccacggtaaagatgtctttgaagcattttataaaaaagatttggcaaaaaga
ctccttgttgggaaaagtgcctcagtcgatgctgaaaagtctatgttgtcaaagctcaag
catgagtgcggtgcagccttcaccagcaagctggaaggcatgttcaaggacatggagctt
tcgaaggacatcatggttcatttcaagcagcatatgcagaatcagagtgactcaggccct
atagacctcacagtgaacatactcacaatgggctactggccaacatacacgcccatggaa
gtgcacttaaccccagaaatgattaaacttcaggaagtatttaaggcattttatcttgga
aagcacagtggtcgaaaacttcagtggcaaactactttgggacatgctgttttaaaagcg
gagtttaaagaagggaagaaggaattccaggtgtccctcttccagacactggtgctcctc
atgttcaacgagggagatggcttcagctttgaggagataaaaatggccacggggatagag
gatagtgaattgcgcagaacgctgcagtccctggcctgtggcaaagcacgtgtgctgatt
aaaagtcccaaaggaaaggaagtggaagatggagacaagttcatttttaatggagagttc
aagcacaagttgtttagaataaagatcaatcaaattcagatgaaggaaactgttgaggaa
caggttagcaccactgagagagtgtttcaggatagacaatatcagattgatgctgctatc
gtcagaataatgaagatgagaaagactcttggtcataatcttctagtttctgaattatat
aatcagctgaaatttccagtaaagcctggagatttgaaaaagagaattgaatctctgata
gacagagactatatggagagagacaaagacaatccgaatcagtaccactacgtggcctga
Homo sapiens (human): 1642
Help
Entry
1642 CDS
T01001
Symbol
DDB1, DDBA, UV-DDB1, WHIKERS, XAP1, XPCE, XPE, XPE-BF
Name
(RefSeq) damage specific DNA binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03420
Nucleotide excision repair
hsa04120
Ubiquitin mediated proteolysis
hsa05161
Hepatitis B
hsa05170
Human immunodeficiency virus 1 infection
hsa05203
Viral carcinogenesis
Network
nt06161
Human immunodeficiency virus 1 (HIV-1)
nt06502
Nucleotide excision repair
Element
N00456
HIV Vpr to CDC25-cell cycle G2M
N01425
Global genome NER
N01430
Transcription-coupled NER
Disease
H00403
Disorders of nucleotide excision repair
H02560
White-Kernohan syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
1642 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
1642 (DDB1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
1642 (DDB1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
1642 (DDB1)
05161 Hepatitis B
1642 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
1642 (DDB1)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
1642 (DDB1)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
1642 (DDB1)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
1642 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
1642 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Beta_propel
Motif
Other DBs
NCBI-GeneID:
1642
NCBI-ProteinID:
NP_001914
OMIM:
600045
HGNC:
2717
Ensembl:
ENSG00000167986
UniProt:
Q16531
Structure
PDB
LinkDB
All DBs
Position
11:complement(61299451..61333105)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacggcccagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcggccgaagacttaaacctgttgattgccaaaaacacgagattagag
atctatgtggtcaccgccgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgcggtcatggagcttttcaggcccaagggggagagcaaggacctgctgtttatcttg
acagcgaagtacaatgcctgcatcctggagtataaacagagtggcgagagcattgacatc
attacgcgagcccatggcaatgtccaggaccgcattggccgcccctcagagaccggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgtctctatgatggccttttc
aaggttattccactagatcgcgataataaagaactcaaggccttcaacatccgcctggag
gagctgcatgtcattgatgtcaagttcctatatggttgccaagcacctactatttgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagaaaag
gaattcaataagggcccttggaaacaggaaaatgtcgaagctgaagcttccatggtgatc
gcagtcccagagccctttgggggggccatcatcattggacaggagtcaatcacctatcac
aatggtgacaaatacctggctattgcccctcctatcatcaagcaaagcacgattgtgtgc
cacaatcgagtggaccctaatggctcaagatacctgctgggagacatggaaggccggctc
ttcatgctgcttttggagaaggaggaacagatggatggcaccgtcactctcaaggatctc
cgtgtagaactccttggagagacctctattgctgagtgcttgacataccttgataatggt
gttgtgtttgtcgggtctcgcctgggtgactcccagcttgtgaagctcaacgttgacagt
aatgaacaaggctcctatgtagtggccatggaaacctttaccaacttaggacccattgtc
gatatgtgcgtggtggacctggagaggcaggggcaggggcagctggtcacttgctctggg
gctttcaaggaaggttctttgcggatcatccggaatggaattggaatccacgagcatgcc
agcattgacttaccaggcatcaaaggattatggccactgcggtctgaccctaatcgtgag
actgatgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaatgga
gaggaggtagaagaaaccgaactgatgggtttcgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcagcagcttatccagatcacttcagcatcggtgaggttggtctct
caagaacccaaagctctggtcagtgaatggaaggagcctcaggccaagaacatcagtgtg
gcctcctgcaatagcagccaggtggtggtggctgtaggcagggccctctactatctgcag
atccatcctcaggagctccggcagatcagccacacagagatggaacatgaagtggcttgc
ttggacatcaccccattaggagacagcaatggactgtcccctctttgtgccattggcctc
tggacggacatctcggctcgtatcttgaagttgccctcttttgaactactgcacaaggag
atgctgggtggagagatcattcctcgctccatcctgatgaccacctttgagagtagccat
tacctcctttgtgccttgggagatggagcgcttttctactttgggctcaacattgagaca
ggtctgttgagcgaccgtaagaaggtgactttgggcacccagcccaccgtattgaggact
tttcgttctctttctaccaccaacgtctttgcttgttctgaccgccccactgtcatctat
agcagcaaccacaaattggtcttctcaaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaattcagatggctatcctgacagcctggcgctggccaacaatagcaccctcacc
attggcaccatcgatgagatccagaagctgcacattcgcacagttcccctctatgagtct
ccaaggaagatctgctaccaggaagtgtcccagtgtttcggggtcctctccagccgcatt
gaagtccaagacacgagtgggggcacgacagccttgaggcccagcgctagcacccaggct
ctgtccagcagtgtaagctccagcaagctgttctccagcagcactgctcctcatgagacc
tcctttggagaagaggtggaggtgcacaacctacttatcattgaccaacacacctttgaa
gtgcttcatgcccaccagtttctgcagaatgaatatgccctcagtctggtttcctgcaag
ctgggcaaagaccccaacacttacttcattgtgggcacagcaatggtgtatcctgaagag
gcagagcccaagcagggtcgcattgtggtctttcagtattcggatggaaaactacagact
gtggctgaaaaggaagtgaaaggggccgtgtactctatggtggaatttaacgggaagctg
ttagccagcatcaatagcacggtgcggctctatgagtggacaacagagaaggagctgcgc
actgagtgcaaccactacaacaacatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggcgaccttatgcgctcagtgctgctgcttgcctacaagcccatggaagga
aactttgaagagattgctcgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaattttctgggggctgaaaatgcctttaacttgtttgtgtgtcaaaaggat
agcgctgccaccactgacgaggagcggcagcacctccaggaggttggtcttttccacctg
ggcgagtttgtcaatgtcttttgccacggctctctggtaatgcagaatctgggtgagact
tccacccccacacaaggctcggtgctcttcggcacggtcaacggcatgatagggctggtg
acctcactgtcagagagctggtacaacctcctgctggacatgcagaatcgactcaataaa
gtcatcaaaagtgtggggaagatcgagcactccttctggagatcctttcacaccgagcgg
aagacagaaccagccacaggtttcatcgacggtgacttgattgagagtttcctggatatt
agccgccccaagatgcaggaggtggtggcaaacctacagtatgacgatggcagcggtatg
aagcgagaggccactgcagacgacctcatcaaggttgtggaggagctaactcggatccat
tag
Homo sapiens (human): 1643
Help
Entry
1643 CDS
T01001
Symbol
DDB2, DDBB, UV-DDB2, XPE
Name
(RefSeq) damage specific DNA binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
hsa
Homo sapiens (human)
Pathway
hsa03420
Nucleotide excision repair
hsa04115
p53 signaling pathway
hsa04120
Ubiquitin mediated proteolysis
hsa05161
Hepatitis B
hsa05169
Epstein-Barr virus infection
hsa05200
Pathways in cancer
hsa05202
Transcriptional misregulation in cancer
hsa05210
Colorectal cancer
hsa05212
Pancreatic cancer
hsa05213
Endometrial cancer
hsa05214
Glioma
hsa05216
Thyroid cancer
hsa05217
Basal cell carcinoma
hsa05218
Melanoma
hsa05220
Chronic myeloid leukemia
hsa05222
Small cell lung cancer
hsa05223
Non-small cell lung cancer
hsa05224
Breast cancer
hsa05225
Hepatocellular carcinoma
hsa05226
Gastric cancer
Network
nt06165
Epstein-Barr virus (EBV)
nt06240
Transcription (cancer)
nt06260
Colorectal cancer
nt06261
Gastric cancer
nt06262
Pancreatic cancer
nt06263
Hepatocellular carcinoma
nt06265
Bladder cancer
nt06266
Non-small cell lung cancer
nt06267
Small cell lung cancer
nt06268
Melanoma
nt06269
Basal cell carcinoma
nt06270
Breast cancer
nt06271
Endometrial cancer
nt06273
Glioma
nt06274
Thyroid cancer
nt06276
Chronic myeloid leukemia
nt06502
Nucleotide excision repair
Element
N00115
Mutation-inactivated TP53 to transcription
N00223
EBV EBNA1 to p53-mediated transcription
N00263
EBV EBNA3C to p53-mediated transcription
N00481
EBV BZLF1 to p53-mediated transcription
N01425
Global genome NER
Disease
H00403
Disorders of nucleotide excision repair
H01428
Xeroderma pigmentosum
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
1643 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
1643 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
1643 (DDB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
1643 (DDB2)
05202 Transcriptional misregulation in cancer
1643 (DDB2)
09162 Cancer: specific types
05210 Colorectal cancer
1643 (DDB2)
05212 Pancreatic cancer
1643 (DDB2)
05225 Hepatocellular carcinoma
1643 (DDB2)
05226 Gastric cancer
1643 (DDB2)
05214 Glioma
1643 (DDB2)
05216 Thyroid cancer
1643 (DDB2)
05220 Chronic myeloid leukemia
1643 (DDB2)
05217 Basal cell carcinoma
1643 (DDB2)
05218 Melanoma
1643 (DDB2)
05213 Endometrial cancer
1643 (DDB2)
05224 Breast cancer
1643 (DDB2)
05222 Small cell lung cancer
1643 (DDB2)
05223 Non-small cell lung cancer
1643 (DDB2)
09172 Infectious disease: viral
05161 Hepatitis B
1643 (DDB2)
05169 Epstein-Barr virus infection
1643 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
1643 (DDB2)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
1643 (DDB2)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
1643 (DDB2)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
1643 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
1643
NCBI-ProteinID:
NP_000098
OMIM:
600811
HGNC:
2718
Ensembl:
ENSG00000134574
UniProt:
Q92466
Structure
PDB
LinkDB
All DBs
Position
11:47214454..47239217
Genome browser
AA seq
427 aa
AA seq
DB search
MAPKKRPETQKTSEIVLRPRNKRSRSPLELEPEAKKLCAKGSGPSRRCDSDCLWVGLAGP
QILPPCRSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWH
PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT
TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRM
HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG
ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN
FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQ
EEARTRK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagaaacgcccagaaacccagaagacctccgagattgtattacgccccagg
aacaagaggagcaggagtcccctggagctggagcccgaggccaagaagctctgtgcgaag
ggctccggtcctagcagaagatgtgactcagactgcctctgggtggggctggctggccca
cagatcctgccaccatgccgcagcatcgtcaggaccctccaccagcataagctgggcaga
gcttcctggccatctgtccagcaggggctccagcagtcctttttgcacactctggattct
taccggatattacaaaaggctgccccctttgacaggagggctacatccttggcgtggcac
ccaactcaccccagcaccgtggctgtgggttccaaagggggagatatcatgctctggaat
tttggcatcaaggacaaacccaccttcatcaaagggattggagctggagggagcatcact
gggctgaagtttaaccctctcaataccaaccagttttacgcctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacattctacgagtttttgccagctcagacaccatc
aacatctggttttgtagcctggatgtgtctgctagtagccgaatggtggtcacaggagac
aacgtggggaacgtgatcctgctgaacatggacggcaaagagctttggaatctcagaatg
cacaaaaagaaagtgacgcatgtggccctgaacccatgctgtgattggttcctggccaca
gcctccgtagatcaaacagtgaaaatttgggacctgcgccaggttagagggaaagccagc
ttcctctactcgctgccgcacaggcatcctgtcaacgcagcttgtttcagtcccgatgga
gcccggctcctgaccacggaccagaagagcgagatccgagtttactctgcttcccagtgg
gactgccccctgggcctgatcccgcaccctcaccgtcacttccagcacctcacacccatc
aaggcagcctggcatcctcgctacaacctcattgttgtgggccgatacccagatcctaat
ttcaaaagttgtaccccttatgaattgaggacgatcgacgtgttcgatggaaactcaggg
aagatgatgtgtcagctctatgacccagaatcttctggcatcagttcgcttaatgaattc
aatcccatgggggacacgctggcctctgcaatgggttaccacattctcatctggagccag
gaggaagccaggacacggaagtga
DBGET
integrated database retrieval system