Hibiscus syriacus (Rose-of-Sharon): 120130567
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Entry
120130567 CDS
T09559
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120130567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120130567
04121 Ubiquitin system [BR:
hsyr04121
]
120130567
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120130567
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120130567
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120130567
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120130567
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120130567
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120130567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RTT107_BRCT_5
zf-RING_2
zf-C3HC4_4
zf-RING_6
zf-HC5HC2H_2
Prok-RING_4
PTCB-BRCT
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
120130567
NCBI-ProteinID:
XP_039003713
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MSLLTKQSVNRAMNPWVLHLQKLGLELKCPICLNLFKRPLLMPCDHLFCDSCIARTEFGS
ECSICKSQCADRDLRHVTFMENIVGIYRSLDAAFTANISHSIEDGVGKTDKFDKCSIQRC
ISDKGYDTPNKDDSSEKVGLHVNRVDQVSLSPPSSGDTKASGNDSEHSLGNYSSKGAGKR
NFDDMTSQKQDNSVLGSDGHSLDSKSQKRLNYGELDMVVKPMDHCQTIQNAQNVVTSDCQ
LGSQNEPSLAVTNLPVTSDNLCGSTSICAFCQSCRMSEVTGVMLHYLNGRPVTGDESFRS
NVIHVHSSCIEWAPQVYYVGDSIKNLKAELARGAKLKCNRCGLKGAALGCYVKSCRRSYH
FPCAKEIPKCRWDHDDFLVLCPAHSSSKFPSEKSRKAHSSSKFPSEKSRNAFSSSKFLNE
KSRNCAPANDVMQTESGQLKFNTFWGQPENKKDWVFCGSALSPEEKFLLIKFAKMIGVIV
TKFWRSDVTHVIASTDENGACTRTLKVLMAISTGKCVLNINWIKECMKAIHPLNEEPYEV
SLDNHGCCDGPKTGRFRVLNNAPKLFDGFNFYFVGDFVSGYKEDLQNLVATTGGNVLGRM
EELIEHNNNGGDKIAQTKTVIVYNLDAPQGSELGEEVTIIWQRVSEAEDLATRIGGQVIG
HTWLLESIAACKLQPFVNNDS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttttgactaagcagagtgttaatagagctatgaatccttgggttcttcatctt
caaaaactgggtctggagcttaaatgtcctatctgtttgaatttgtttaaacggccattg
ttgatgccgtgcgaccatctgttttgcgattcatgcatagcccgaactgagtttggatca
gagtgctctatttgcaaatctcaatgtgcagatcgagatctaaggcacgtgaccttcatg
gagaatatagtgggaatctatagaagtttggatgcagcatttactgcaaatatttctcat
tctattgaagatggtgttggcaaaactgataaatttgataagtgcagcattcaaaggtgt
atttcggataaaggttacgatactcccaacaaagatgatagttctgagaaagttggtttg
catgttaatcgagtggatcaagtatctctcagccctccttccagcggcgatacaaaggcg
tccggcaatgatagtgaacatagtcttggaaactattcatccaagggagctggtaagaga
aattttgatgacatgacaagtcaaaagcaggacaattctgttctagggagtgatggtcat
tctttggattccaagagtcaaaagaggttgaactatggagaactagatatggttgtcaag
cctatggatcattgtcaaacaattcagaatgctcagaacgtggtgacttctgattgtcaa
ttaggatctcaaaatgagccatcccttgctgttacaaatcttcctgtgacatcagataac
ctgtgtggaagtacatccatttgtgcattttgccagtcttgtagaatgtccgaggtcact
ggagtgatgctacattatctcaatggaagaccagtcacaggagatgaatcattcagatca
aatgttatacatgttcacagctcatgtatcgaatgggcacctcaagtgtattatgttggc
gattctattaagaatcttaaggcagaacttgcaaggggtgcgaagttgaagtgcaacaga
tgtggactaaagggggcagcacttggctgttatgtgaagtcttgccgcagaagttatcat
ttcccttgtgcaaaagagattccaaaatgtcgatgggaccatgacgactttcttgtgctt
tgtcctgcccactcttcatccaagtttccaagtgagaagtctagaaaagcccactcttca
tccaagtttccaagtgagaagtctagaaatgccttctcctcatccaagttcttgaatgag
aagtctagaaattgtgcgcctgctaatgatgtcatgcaaactgaaagtggtcagctgaag
ttcaacaccttctggggccagccagaaaataaaaaagattgggttttctgtggatctgct
ttgtctccagaggagaagttccttctgatcaagtttgcaaaaatgattggcgtaattgta
acgaagttttggaggtcggatgtcactcatgtgattgcttctacggatgagaatggtgca
tgcaccaggacacttaaagttctcatggccatttcaactgggaaatgtgttcttaatata
aattggataaaggaatgcatgaaagctatacatcctttgaatgaagaaccttatgaagta
agcctcgacaaccatgggtgttgtgatggcccgaaaaccggcagattcagggtattgaat
aatgcaccgaagctctttgatggcttcaacttttattttgtgggtgactttgtgtctggt
tataaggaggatcttcaaaatctggttgccaccacgggcggtaatgttttgggaagaatg
gaggaactaattgagcataataacaatggtggtgataaaatagctcaaacaaagacggtt
attgtgtataatttggatgcacctcaaggttcagagttgggagaagaagttactattatt
tggcagagggttagtgaagcagaagatttagccacaagaataggtggacaagtcattggt
cacacatggcttttagaatcaattgcagcatgtaagttgcagccttttgtcaacaacgat
tcataa
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