Hibiscus syriacus (Rose-of-Sharon): 120153166
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Entry
120153166 CDS
T09559
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120153166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120153166
04121 Ubiquitin system [BR:
hsyr04121
]
120153166
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120153166
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120153166
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120153166
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120153166
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120153166
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120153166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4_3
BRCT_2
zf-RING_UBOX
zf-HC5HC2H_2
zf-RING_6
zf-RING_5
zf-C3HC4
Prok-RING_4
zf-RING_2
RTT107_BRCT_5
zf-C3HC4_4
PTCB-BRCT
zinc_ribbon_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120153166
NCBI-ProteinID:
XP_039021092
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSLSTKQSVNRAMNPWALHLQKLGLELKCPLCLNLFKRPLLMPCDHLFCDTCIARTEFGS
ECPICNAQSADRDLRPVTFMENIVGIYRSLDAAFTANISPSPVASVGKNDKFDKCITQRC
IGDKGYETPNKDGVAFDSSGNVGLHVNQVDQTSFGPSSCGYTKASDTDSEHSLTNYSVKG
VGKRNFDDMTSQKQCNSALRIDSHFWDSKSPKRLNHEQLGSQIEPSLAGTNLPVTSDNMC
GNSAICGFCQSSRVSEATGMMLHYLNGKQVTGDASFSSNVIHVHSLCIEWAPQVYYVDES
VKNLKAELARGAKLKCSKCGQKGAALGCYVKSCRRSYHFPCAKEIPKCRWDHDDYLVLCP
AHSSVKFPSEKSTNAHSSSKLLTEKSGNCVSANDGIPTESGRLKSYTFWGQPDDKKIWVF
CGSALPPEEKFLLIKFANMIGATVSKFWKPDVTHVIASTDGNGAYTRTLKVLMAISNGKW
ILNINWVKECLKAMHPLSEEPYEVSLDNHGCCDGPKTGRLRVLNDQAPKLFDGFNFYFVG
DFVSGFKEDLQNLVVTAGGTVLMRMEELIEHNNNGDQTSQAKMVVVYNLDAPQGSELGEE
VSIIWQRVSEAQDLASKISGLVIGHTWLLESIAACKLQAFVN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttcaactaagcagagtgttaatagagctatgaatccttgggctcttcatctt
caaaaactgggtctggagcttaaatgtcctctctgtttgaatttgtttaaacggccatta
ttgatgccgtgcgaccatctgttttgcgatacgtgcatagccagaactgagtttggctca
gagtgccctatttgcaatgcccaatctgcagatcgagatctaaggcctgtgaccttcatg
gagaatatagtgggaatctatagaagtttggatgctgcatttactgcaaatatttctcct
tcgcccgtagccagtgttggtaaaaatgataaatttgataagtgcataactcaaaggtgt
attggagataaagggtatgagactcctaacaaagatggggttgcatttgatagttctggg
aatgttggtttgcatgttaatcaagtagatcaaacatcttttggcccttcttcctgtggc
tatacaaaggcttctgatactgatagtgaacattctctcactaactattcagtcaaggga
gttggcaagagaaattttgatgatatgacaagtcaaaagcagtgcaattccgctttaagg
attgacagtcatttttgggattccaagagtccgaagaggttgaaccatgaacaattagga
tctcaaattgaaccatctcttgctggtacaaatctgccagtgacatcagacaacatgtgt
ggaaacagtgccatttgtggattttgccagtcctctcgagtctcagaggccactgggatg
atgctccattatctcaacggaaaacaagtaacaggagatgcatcattcagctcaaatgtt
atacatgttcacagcttgtgtattgaatgggcgccccaggtgtattatgttgatgaatct
gttaagaatcttaaggcagaacttgcaaggggtgcaaagctgaagtgcagcaaatgtggg
caaaagggggcagcacttggttgttatgtgaagtcttgccgcagaagttatcatttccct
tgtgcaaaagagattccaaaatgtcgatgggatcatgatgactatctcgtgctttgtcct
gcccattcttctgttaagtttccaagtgagaagtctacaaatgcccattcttcatccaag
ttgttgactgagaagtctggaaattgtgtgtctgctaatgatggcatacctactgaaagt
ggccggctgaaatcttacactttctggggccagccagatgataaaaaaatttgggttttt
tgtggctctgctttgcctcctgaggagaagttccttttgatcaagtttgcgaacatgatt
ggtgcaactgtatccaagttttggaagccggatgtcactcatgtgattgcttctacagat
gggaatggtgcatacaccaggacacttaaagttctcatggccatttcaaacgggaagtgg
attcttaatataaattgggtaaaggagtgcttgaaagccatgcatcctttgagtgaggaa
ccttacgaagttagtctcgataaccacgggtgttgtgatggccctaaaactggaagactc
agggtattgaatgatcaggcaccaaagctctttgatggctttaacttttattttgtgggc
gatttcgtgtctggtttcaaggaagatcttcaaaatctggttgtcaccgcgggtggtact
gttttgatgagaatggaggaactaattgaacataataacaacggtgatcagacatctcaa
gcaaagatggttgttgtgtataacctggatgctccccaaggatccgagttaggagaagag
gtttcaattatttggcagagggttagtgaagcacaggatttagcctcaaaaattagtgga
ctagtcattggtcatacatggcttttagaatcaattgcagcatgtaaattgcaggctttt
gtcaattag
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