Ipomoea nil (Japanese morning glory): 109161537
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Entry
109161537 CDS
T04663
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109161537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109161537
04121 Ubiquitin system [BR:
ini04121
]
109161537
03036 Chromosome and associated proteins [BR:
ini03036
]
109161537
03400 DNA repair and recombination proteins [BR:
ini03400
]
109161537
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109161537
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
109161537
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109161537
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109161537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_6
zf-HC5HC2H_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
Prok-RING_4
zf-RING_2
zf-RING_5
PTCB-BRCT
RTT107_BRCT_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
109161537
NCBI-ProteinID:
XP_019165530
LinkDB
All DBs
Position
Un
AA seq
690 aa
AA seq
DB search
MVNSGSSLKKKSVMADSQSIARFLNPWTLHLQKLGLELKCPLCLKLLNKPVLLPCNHLFC
NFCVPDSTQCGSECPVCKHQFSDRDIRPAPYIENMVSIYQSLDAAFVANVSLSLSSAVGR
SLEQSPVSVSSAQGTSSKEMRSDKAVMSNLCLNKGLMQRDGRIIVLNGKNGSDPLPTSVL
AGNMTDGRPLAEEIDVNQLPQQSPVSYLSSDDNKDVDGNTCELACRDLGFGKTAVNISDV
DGRDMTTSEICCRSRDDDASLERDTKRQKKLNYRLSEMDSQIGGNTRKEIASECNMEHIA
GSSLDVKAICAFCKSSNTTEVTGPMLFYANGKEVVDTFPDATPAHRLCIDWAPQVYYDGE
IIKNFKSELARSAKLKCNICGLKGAALGCYMKSCQRTYHMPCAFGIQECRWDLDNFLMLC
PSHKSVRFPNEKLKSQKCSTVEKKKSAKLATEQFNFWATSPDGPKQWVLCGSALSQEDKY
TLVKFAKMCGATVSKLWTPNVTHVLASTDAEGACTRTLKVLMAILGGKWILSMDWVRTCM
DFNGPMNEEPYEITLDNHGCSDGPKTGRLRASTNAPKLFVGLKFYISGDFLAPYLKDLLQ
LVEVAGGTIVENKEQLIAETRDLAPTDPPYCVIVYNCDPPRGCMPAEESSILLRRFAEAD
EIAKQIGCLAIKHTWILESIAGCKLVPFMC
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggttaacagcggcagttcactgaagaagaaatctgtaatggcggattctcaaagcatc
gcgaggtttctgaacccatggactcttcatctccaaaagctcggccttgagctcaaatgc
cctctctgcttaaagctgttgaataagcccgtcttgcttccttgtaaccaccttttctgc
aatttttgcgttccggattcgacccaatgtggatctgaatgccctgtgtgtaaacatcag
ttctctgatagagacataaggcctgcaccttatattgaaaatatggtgtctatttaccaa
agcttggatgctgcgtttgttgccaatgtctcgttgtctttgtcttcagctgtaggaaga
tcattggagcagtctcctgtttctgttagttctgctcaagggacatcatcaaaggagatg
cgatctgacaaagctgtaatgtctaacctttgcttaaacaaggggcttatgcagagggat
gggcgcataatagttttgaatggcaagaatggttccgatcccttgccaacttctgtattg
gcagggaatatgactgatgggaggcctttggcagaggaaatagatgtgaatcaattgcca
caacaatcaccggttagctatctttcatcggatgataacaaagatgtggatggcaatact
tgtgaattggcttgcagggatttgggttttgggaagacagcagtaaatatatctgatgtg
gatggtcgagatatgactacgagtgaaatttgctgcagaagtagagatgatgatgcatct
ctagaaagggatactaagagacagaagaaattgaactacagattatcagagatggacagc
cagattggtggcaatactaggaaggaaattgcttctgaatgcaatatggaacatatagca
ggttcttcccttgatgtaaaagctatttgtgctttctgcaagtcctcaaacacgacagaa
gttaccggaccaatgttgttctatgcaaatggaaaggaagttgtggacacttttcctgat
gccacacctgctcacaggctatgcattgactgggcacctcaagtatattatgatggagaa
atcattaagaatttcaagtctgaattggctagatctgcaaaactcaagtgtaatatctgt
ggactgaaaggggcagctcttggctgctatatgaagtcttgtcaaaggacttatcacatg
ccctgtgcatttggaatccaagagtgccggtgggatttggataactttttgatgttgtgt
ccaagtcataagtccgtaagatttccaaatgaaaagctgaagtctcagaagtgttccaca
gtggaaaagaagaagtccgctaaactagcgaccgagcaatttaacttctgggcaacatca
cctgatggaccaaagcaatgggttctatgtgggtctgctctatcacaagaggacaagtat
actttggtaaagtttgctaaaatgtgtggtgcaacggtgtccaagttatggacaccaaat
gtgacacatgttcttgcttcaacagatgcggagggtgcatgcacaaggacactgaaagtt
ctcatggccattttaggcggaaaatggatcctttcaatggactgggtaagaacttgcatg
gattttaatggtcctatgaacgaagagccttacgaaattaccttagacaatcatggctgc
tctgatgggccaaagaccggcagacttagggcttcaaccaatgcaccaaagctttttgta
ggtttgaaattttatatcagtggagatttcttagcaccttatttaaaggacctgcttcag
ctggttgaagtggcgggagggaccattgtggagaacaaggaacagttgatagctgaaacg
cgtgatttggcaccaactgatccaccttattgtgtgattgtttataactgcgatcctccc
cggggctgcatgccagcagaagaaagctccattctgctgcgaagatttgcagaagccgat
gagattgctaaacagattggttgtctggccattaaacacacttggattctggaatccatt
gcaggatgtaagctggttccttttatgtgttga
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integrated database retrieval system
