Ipomoea triloba (trilobed morning glory): 116017426
Help
Entry
116017426 CDS
T07384
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116017426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116017426
04121 Ubiquitin system [BR:
itr04121
]
116017426
03036 Chromosome and associated proteins [BR:
itr03036
]
116017426
03400 DNA repair and recombination proteins [BR:
itr03400
]
116017426
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116017426
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
116017426
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116017426
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116017426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
zf-RING_6
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
PTCB-BRCT
Prok-RING_4
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_4
zf-RING_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
116017426
NCBI-ProteinID:
XP_031113873
LinkDB
All DBs
Position
4:30285186..30290265
Genome browser
AA seq
683 aa
AA seq
DB search
MADSQSIARFLNPWTLHLQKLGLELKCPLCLKLLNKPILLPCNHLFCNCCVPDSTQCGSE
CPVCKHQFADRDIRPAPYIENMVSIYQSLDAAFVANVSLSLSSAVGRSLEQSPVSVSSAQ
GKSSKEMRSDKAVMSNPCLNKGHMQRDGRKIVLNGEKGSNPLPTSVLAGYITDGRPLAEE
IDVNQLPQQSPVSYLSSDDNKDVDGNTCELACRDLGFRKTAVNVSAVDGRDMTTSEICCR
STDDDASLERDTKRQKKLNYRLSGMDSQIGGNTRKEIASECNMEHIAGGCAAADSSLDVK
ATCAFCKSSNTTEVTGPMLFYANGKEVVDSFPDATPAHRLCIDWAPQVYYDGEIIKNFKS
ELARSAKLKCNICGLKGAALGCYMKSCQRTYHMPCAFGIQECRWDLDNFLMLCPSHKSVR
FPNEKLKSQKCSTVEKNKSSKLVTLQFNFWATSPDGPKQWVLCGSALSSEDKYTLVKFAK
MCGATVSKLWTPNVTHVLASTDAEGACTRTLKVLMAILGGKWILTMDWVRACMEANGPMN
EEPYEITLDNHGCSDGPKTGRLRASTNAPKLFLGLKFYISGDFLAPYLKDLLQLVEVAGG
TIVENKEQLIAEMRDLAATDPTYCVIVYNCDPPRGCMPTEESSILLRRFAEADELAKQIG
CLAIKHTWILESIAGCKLVPFVC
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcaaagcatcgcgaggtttctcaacccatggactcttcatctccagaag
ctcggccttgagctcaaatgccctctctgcttaaagttgttgaataagcccatcctgctt
ccttgtaaccaccttttctgcaattgttgcgttccagattcaacccaatgtggatctgaa
tgccctgtttgtaaacatcagtttgctgatagagacataaggcctgcaccttatattgaa
aatatggtgtctatttaccaaagcttggatgctgcgtttgttgccaatgtctcgttgtct
ttgtcttcagctgtaggaagatcattggagcagtctcctgtttctgttagttctgctcaa
gggaaatcatcaaaggagatgcgatctgacaaagctgtaatgtctaacccttgcttaaac
aagggacatatgcagagggatgggcgcaaaatagttttgaatggtgagaaaggttccaat
cccttgccaacttctgtcttggcagggtatataactgatgggaggcctttggcagaggaa
atagatgtgaatcaattgccacaacaatcaccagttagctatctttcatcagatgacaac
aaagatgtggatggcaatacttgtgaattggcgtgcagggatttgggttttcggaagaca
gcagtaaatgtatctgctgtggatggtcgagatatgactacaagtgaaatttgctgcaga
agtacagatgatgatgcatctctagaaagggatactaagagacagaagaaattgaactac
agattgtcagggatggacagccagattggtggcaatactaggaaggaaattgcttctgaa
tgcaatatggaacatatagcaggtggatgtgctgctgcagattcttcccttgatgtgaaa
gctacttgtgctttctgcaagtcctcaaacacaacagaagttaccggaccaatgttgttc
tatgcaaatggaaaggaagttgtggactcatttcctgatgccacacctgctcacaggcta
tgcattgactgggcacctcaagtatattatgatggagaaatcattaagaatttcaagtct
gaattggctagatctgcaaaactcaagtgtaatatctgtggactgaaaggggcagctctt
ggctgctatatgaaatcttgtcaaaggacttatcacatgccctgtgcatttggaatccaa
gagtgccggtgggatttggataactttttgatgttgtgtccaagtcataagtctgtaaga
tttccaaatgaaaagctgaagtctcagaagtgttccacagtggaaaagaacaagtcctct
aaactagtgactttgcaatttaacttttgggcaacatcaccagatggaccaaagcaatgg
gttctatgtgggtctgctctgtcatcagaggacaagtatactttggtaaagtttgctaaa
atgtgtggtgcaacggtgtccaaattatggacaccaaatgtgacacatgttcttgcctca
acagatgctgagggtgcatgcacaaggacacttaaagttctcatggccattttaggcgga
aaatggatccttacaatggactgggtaagagcttgcatggaggctaatggtcctatgaac
gaagagccttacgaaattaccttagacaatcatggctgctctgatggacccaagactggc
agacttagggcttcaaccaatgcaccaaaactctttttaggtttgaaattttatatcagt
ggagatttcttagcaccttatttaaaggacctgcttcagctggttgaagtggccgggggg
accatcgtggagaataaagaacagttgatagctgaaatgcgtgatttggcagcaactgat
ccaacttattgtgtgattgtttataactgtgatcctccccggggctgcatgccaacagaa
gaaagctccattctgctgcgaagatttgcagaagccgatgagttagctaaacagattggt
tgtctggccattaaacacacctggattctggaatccattgcaggatgtaagctggttcct
tttgtgtgttga
DBGET
integrated database retrieval system
