Lupinus angustifolius (narrow-leaved blue lupine): 109357162
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Entry
109357162 CDS
T04664
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109357162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109357162
04121 Ubiquitin system [BR:
lang04121
]
109357162
03036 Chromosome and associated proteins [BR:
lang03036
]
109357162
03400 DNA repair and recombination proteins [BR:
lang03400
]
109357162
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109357162
Ubiquitin system [BR:
lang04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
109357162
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109357162
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109357162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-HC5HC2H_2
zf-C3HC4_4
PTCB-BRCT
RTT107_BRCT_5
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109357162
NCBI-ProteinID:
XP_019456479
LinkDB
All DBs
Position
LG09:complement(7149746..7155939)
Genome browser
AA seq
688 aa
AA seq
DB search
MSHSLNPWMFNFQKLALELKCPLCLSLFKDPVLLPCNHLFCKSCLGEFTMGLMKCECAVC
KTKYAERDVRNMPFVENMVSIYRSLESTFSPSLLPQRSSDDVRVLTPCQASLNSSYGNKK
MDKVPSSLPHSKEVGAGKSHKFKGSDTVVHDKTEGLELSPGGRVDSHSTGKPNPMQHSQM
AVGGHGDCKVMEMDVNQVTQSATGSPPFCDTKGSECSDLDSEHPLVAGRVEKSSLKRATT
FESDGLMIELKRQKNNLAADGYVQSSSTYHNNLVGSCSNMDLKSGMGPGAMFVAKPDDSH
TSTSICSFCQSSKISEATGEMLHSANGYMVTGDKAMQPNVIHVHKTCANWAPQAYFVDDI
VKNLKSEVARGSKLKCSKCGLKGAALGCLVKSCRKTYHAPCAMEISTCRFDHENFLMLCP
AHARVKFPNEKSRSKKQPTQNLPALTHLPSHESNPLPALQDDSKKLVFCGSALPPNEKAL
FVNFASKVGAVVTKYWTPSVTHVIAATDENGACSRTRKVLMAILNGQWILKMDWLKACME
GTNMVEEEPYEIILDNQGCHGGPKTGRLRALANEPKLFSDFKFYFSGDYVTTYKEDLEDL
VEVGGGTVLRSKEELEAKRHECVAAPWKLLIVYNIDPPLGCKLGEEVSILWQRLNDAQDL
AANTGYQIIGHTWILESIASCNLQPFVS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagtcactcattgaatccatggatgttcaattttcagaagctcgctcttgaactcaaa
tgtcctctctgtttgagcttattcaaggatccggtgttacttccgtgcaatcatttgttt
tgcaagtcatgcttaggtgaatttacaatgggtttgatgaaatgtgaatgtgctgtgtgt
aaaactaagtatgctgaaagagatgtgaggaacatgccttttgtggaaaacatggtatcc
atctatagaagcttggagtctaccttctctcctagtttgcttccacagcgttcttctgat
gacgtgagggttttgacaccatgtcaagcatctctcaattcaagctatggtaataaaaag
atggataaggttccgtcgagtttacctcattctaaagaggttggggctggaaagagtcac
aagttcaaggggagtgacactgtagtgcatgataaaactgaggggcttgagttgtctcct
gggggaagggttgactctcacagtacaggaaagcctaatccaatgcagcattcccagatg
gcagttggtgggcatggagactgcaaagttatggaaatggatgtgaatcaagtgacacaa
tcggcaacaggcagccctccattttgtgacaccaaaggttcagagtgcagtgatcttgac
agtgagcatccattggtagctggaagagtggagaaatcttcattgaagagagcaaccacc
tttgaatctgatggtctgatgatagagctcaaaagacaaaaaaataatttggctgcagat
ggctatgttcagtctagctccacatatcataataatttagtgggttcctgctctaacatg
gaccttaaatctggaatgggccctggtgcaatgtttgttgcaaaaccagatgattcacac
acaagtacaagcatctgttcattttgccagtcctctaaaatctcagaggctactggggaa
atgttgcattctgcaaatgggtatatggttacaggagataaagcaatgcaaccgaatgtc
atacatgtgcataaaacttgtgctaactgggcaccacaagcgtattttgttgatgacatt
gtcaagaatttgaaatctgaagtggctaggggatcaaaattaaaatgcagcaaatgtggt
ctaaaaggagctgctcttggctgccttgtcaaatcatgtagaaaaacatatcatgctcct
tgtgcaatggagatatcgacttgccgtttcgatcatgagaattttctaatgctctgtcct
gctcatgctcgtgtcaaatttccaaatgagaaatcccggtctaagaaacaacccactcag
aaccttccagctttaactcatctgccgtctcatgagtcaaaccctcttccagctttacaa
gatgatagtaagaaattggtattttgtggatctgctctaccacctaacgaaaaggcactt
ttcgtcaattttgcaagtaaggttggtgctgtggtgaccaagtattggacccccagtgtc
acccatgtgattgctgcaactgatgaaaatggagcatgctccaggacacggaaagttctc
atggcaattctaaatggacaatggattctcaaaatggattggctaaaggcttgcatggaa
gggacaaatatggtagaagaggaaccatacgagattatccttgacaaccaagggtgtcat
ggtggcccaaaaactggcagacttagggcattggccaatgagcccaagctattcagtgac
ttcaagttttatttttctggggattatgtgactacatataaggaagatcttgaagatttg
gttgaggtaggaggaggtactgtcttgagaagcaaggaagaattagaagctaaaagacat
gaatgtgtagcagctccttggaagttgctcattgtctacaatattgatcccccactagga
tgtaagttgggggaggaagtttcaattctatggcagagactgaacgatgcccaagattta
gcagctaatactggttaccaaatcattggtcacacatggattctggagtccattgcttca
tgtaatttgcaaccttttgttagctaa
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