Lycium barbarum (goji berry): 132610669
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Entry
132610669 CDS
T09483
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132610669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132610669
04121 Ubiquitin system [BR:
lbb04121
]
132610669
03036 Chromosome and associated proteins [BR:
lbb03036
]
132610669
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132610669
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
132610669
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
132610669
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132610669
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
132610669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
132610669
NCBI-ProteinID:
XP_060180983
LinkDB
All DBs
Position
9:26477962..26492028
Genome browser
AA seq
462 aa
AA seq
DB search
MRCTVGGEDIFHERDMKRQKKLNYGLSESLESHGHIQQRYPSSEIVANSNCNLENKICES
PSVGQPKAVTDQHPLKESVCAFCHSPKTTERTGLFMYYANGKEVVENVTSLPKVICVHSK
CIEWTPQVYYVGDIIQNLDTEVARAAKLKCSSCGMKGAALGCYVKSCRRSYHVPCAFEIQ
DCRWDRDEFVMLCPIHKSVKFPSEKSKSRKHVRREVYPETSPLTTEQLSFWARSSDGPKE
WVLSGSALSSGEKYMLVKFANMCGATVCKFWKPNVTHVVATIDEKGACTRTMKVLMAILS
GKWILTMDWVKACIAANGPVNEEPYEITLDNYGCCGGPKAGRLRVSTDAPKLFDGFKFYL
SGDFMPAYKSDLLDLVEKAGGTIIQSKEQLVQQTRAAQDTQPPSLVVYNCEPPQGCMFEE
ESSILQQRLAEAEDLAKQIGCQAIQHTWILESIAACKLVPFC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcacagttgggggtgaagatatatttcatgaaagggatatgaagaggcaaaag
aaactaaattatggtttgtcagagagcttagaaagtcatggtcatattcaacaaagatat
cctagttctgaaattgttgctaattccaactgcaatttggagaataaaatatgtgaatct
ccttctgttggtcagccaaaagcagttacagatcaacatcctctgaaagaaagcgtttgt
gctttctgtcattcacctaagaccacagagagaactggactgttcatgtactatgcaaat
ggaaaggaagtggtggaaaatgtcacttctcttcccaaagtcatatgtgtgcacagtaaa
tgcattgaatggacacctcaagtatattatgttggagatattatacagaatttggacacc
gaggtggcaagagctgcaaaactcaaatgtagtagttgtggcatgaagggtgcagcactt
ggctgctatgtaaagtcttgcaggaggagttatcatgtgccctgtgcatttgaaatccag
gattgccgttgggatagggacgagtttgtcatgctgtgcccaattcataaatctgttaaa
tttccaagtgagaagtcgaagtccagaaagcatgtcaggagggaagtgtatccagagact
tctccactaaccaccgagcaattgagtttttgggcaagatcatcagatggacccaaagaa
tgggttctttctgggtctgctttatcctcaggagagaagtatatgttggtgaaatttgct
aatatgtgtggtgcaactgtttgcaagttttggaaaccaaatgtcacgcatgttgttgca
acaatagatgaaaagggtgcatgcaccagaacaatgaaagttctcatggcgattttgagt
ggaaaatggattctaactatggactgggtaaaagcttgtattgcagcaaatggcccggta
aatgaagaaccatatgaaataactctagacaattatggttgttgtgggggccccaaagct
ggaaggctgagggtctcaactgatgcgccaaagctttttgatggtttcaagttttatttg
agtggagattttatgccagcttacaaaagtgacttattagatctagttgagaaggctgga
ggcactatcattcagagcaaggaacagttggtgcagcagactcgcgctgcacaggacact
caaccaccttctctagttgtatacaactgtgaacccccacagggttgcatgtttgaagaa
gaaagcagcattttacaacaaagattagctgaagctgaggatctagccaagcaaattggt
tgtcaagccattcaacatacttggattctggaatctattgctgcatgtaaattagtacct
ttttgctga
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