KEGG   Lates calcarifer (barramundi perch): 108884413
Entry
108884413         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: methylcytosine dioxygenase TET3
  KO
K13097  methylcytosine dioxygenase [EC:1.14.11.80]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108884413
   03041 Spliceosome [BR:lcf03041]
    108884413
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     108884413
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    108884413
Spliceosome [BR:lcf03041]
 Complex A
  Other components
   Complex A specific factors
    108884413
SSDB
Motif
Pfam: Tet_JBP zf-CXXC
Other DBs
NCBI-GeneID: 108884413
NCBI-ProteinID: XP_018533796
LinkDB
Position
LG16_LG22:8587845..8617219
AA seq 2212 aa
MPATTKPARRQTPAQRKNAQKVIGTKRQTCNSNKPQGRATERPQKAPAESRRSTVRAQVQ
LGRSPHGRGVSGPAGQGPGRSPGRVNHALNVTGSARLRRPSNLPEHCSELQDPLGRRTSL
RGTRVSVTPCQPPKPGRGGRNSRGSRGRGAASQHGNTTNQPSSTSINDSTPDKGDEESEK
VDTCDVEEILPVSLKTDFEVPASIKDQGLGVNNAKEGSPLKADSPPCNDTLDDCVQCSCD
STITQQDKKTVIHNSEGDLRCVTGAPMCDDVDGQLNLCSDASKGSPSEPSVLTSVGSPGV
QGGSEGNDTSSILGNKLDHPGSDGKQDDVCTVHQEEGDTLDLKEDSADERMIVITERKEE
INHEEGESLEAEKVVERQSKTVEETEEIVERLGNCGGEDRGKKEENDVCIGPTDPHLSTL
ASPPPDPPHSNDGLTAQSESPVSAPPVSNTATSNPTKAPSTSESVELEVLSQGKTDMQPT
IHGAKPHFPGSSAVPETAPMLQTVLVKRSTPVIVRSDSLKPRGWRDSSRGEPNQLQSLEI
PSPQGERQACTPAETQTKDSESNPEPLECHSQKETSSLSSSLVAQSSTDVLRAECEPNLS
EDSTVAGVTEPDSVPKISTPSLDGSSTLSCSSESTRSSFSFDTESEAGYGEPSPSVLPRS
WGPEGAGMPSWTAPKPHKKERKKRSRCGTCEPCLRKISCGQCSCCLNRRTGHQICKLRKC
VELKRRRPSSPLIPTTAQVVPESGSVNGKGKAQMDDTHTAAEEDEGEEGHIPHTQSPPIN
HSLTHNLASDQAGWPALIKREPGLELTSIALHQHVCSSVGFQNGSTENLTKPNGANMTTG
SHSDLKSAFKRTAMASEPQTSIIATIPKDCSENGPKTPPDDMSVPLKKIKLEEPWVWITE
QATTQLSDEDEVCENPLSTLAAVVCLSVRERKGLEEKLFCSRSSILRSIKTEPPDLHFVK
KEPGDLKNDLCQKSTPVSQQKTPQPMKSEPPPSILLPSVQSLAEKRNLSFDQAIAIEALT
QLAAIPESTPGSIKAESKCEHPISTAAPFSTSSTNTTLQEAKPTAAICYNKVSVISSPLH
QMSVIRPPVARQGNVIQCSRGSNSNTKLSLQDLLEASSDSDKAPCRRTEQGFGSHFIKSE
SSYKHPSDMKFSKDHERLFGTEDRDGVGKARRNRDEEEVAAQLADLAFIIQSRQSQQSEN
NPPKGAPVSAIKYNYNSQLSPSQKKALVKKAKATPPKPRKKKISDGLHEGVNRRTPLSKR
MPNGEMPNRGRGQKILPQGKSGLHHKRNLFLPQAQIDLKRYLAEAQEERRQLIHHSNSHN
TALIGPQTQNYTTLTRINHTCGQENQPWSLSNGPLHQHNPCNGHAAGPEQECERHLLSQV
AQPCGGLQHGADPNTSSASTALLSHTTGHHGLANGFSGARQSPPPSQQSYYKLERSGPVT
VLSTATDGDMGHSAESTPSKNSVNSFLESPMSFLDTPTKNLLNTPSKKLADLPSCQCMDQ
IIEKEEGPYYTHLGAGPSVAAVRELMENRYGAKGSAVRVEVVVYTGKEGRSSQGCPIAKW
VIRRGSEEEKLLCLVRQRPGHYCDAAVLVILILAWEGIPRPVADHLYQELTETLFKYGSP
TSRRCALNEDRTCACQGLDPDTCGASFSFGCSWSMYFNGCKFARSKVPRKFRLLGDYREE
EEKIENNLQNLATDLAPLYKRLAPEAFQNQVEHEETGCECRLGRKEGRPFSGVTACVDFC
AHAHKDTHNMNNGSTVVCTLTKEDNRAVRNIPQDEQLHVLPLYKISDRDEFGQVEGQWAK
IQSGALQVLSSFPREVRLLAEPVKSARKIRQEARLKAQAERLEKKLGLAPLTPGKMKNDT
PNKEPQGYYSSYRIPPRPASVGRYLPERNQHSTYSQSTSSYPTPGAGVTPQGEVISPNHH
SLPGLQFGQNGSALSYKTMSDSVNGYSPASGDQSVHSERIPPHNVLSDYPCTFKTEPNKV
HCSSLCRPSPSGSAPPPSSFSPRPTSEGLFSRLNGLHRAAGDVTAEVRGHGLPPLSSLPL
PLQTPPLEPEEVKQEEVWSDSEHNFLDHNIGGVAVAPSHGSILIECARRELHATTPILRP
NRSHPTRISLVFYQHKSLNEPGHGMAMWDAKMAKRERDREEEAERLRMEDSLNNGNGARG
AELEEEGGEKAEEARRIMNVPTRQTWTLPRDGVITVSPYALTQVTGPYNRWT
NT seq 6639 nt   +upstreamnt  +downstreamnt
atgcctgctactaccaaacccgccaggagacagacacctgctcagaggaaaaatgcccag
aaagtgattggcaccaaaaggcaaacctgtaactcaaataaaccccaaggaagagccaca
gagaggccccagaaagcacctgcagaatcaagaaggtcaacagtcagagcccaggtgcag
ttggggcgaagcccccatggaagaggggttagtgggccggctggccagggccctgggagg
tcccctggcagggttaaccatgccctaaacgtaacaggatctgcaaggcttagacggccg
agcaatctgcctgaacactgcagcgagttacaagaccccctagggcgaagaacatccctg
cggggcacccgggtgtctgttaccccctgccagcctcctaaacctggcagaggggggaga
aacagcagggggagcagagggagaggagcagcatcccagcacggaaacacaacaaaccag
ccttcaagcaccagcatcaacgattcgactcctgacaagggtgatgaggaaagcgagaaa
gtggacacctgtgatgttgaagaaatccttccagtgtctctaaagactgattttgaagtt
ccagcgagtatcaaagatcagggtctaggagtcaacaatgctaaagagggcagccctctt
aaagcagattcaccaccgtgtaacgacacactggacgactgtgtgcagtgcagctgtgac
agtaccataacccagcaagacaaaaagactgtcatccataacagtgaaggtgacctgagg
tgtgtgactggggcccccatgtgtgatgatgttgatggacagctaaacctctgcagtgac
gcaagtaaaggcagtccctctgagccctctgtgctaacgagtgttggctcaccaggggtg
cagggtggcagcgagggaaatgacacttcatctatccttggaaataagcttgatcatcct
ggcagtgatggtaagcaagatgatgtgtgtactgtccatcaggaggaaggtgacacgttg
gacttgaaagaggacagcgcagatgaaagaatgatagtcatcactgagagaaaagaggag
ataaatcatgaggaaggagagagtttagaggcagagaaagtagttgagagacaaagtaag
actgtggaagagacggaggagattgtcgagaggctgggtaactgtgggggagaagatcga
ggaaaaaaagaggagaatgatgtatgcatcggtcctactgacccccacctcagcactcta
gcttctccacctccagatcctcctcactctaacgatggactgacggcacagtctgaatca
cctgtaagtgcgccaccagtctccaacacagctacctcaaatcccaccaaagccccatcc
acctcagagtcagttgaactagaggttctgagccagggtaagacagacatgcaacctacc
attcatggtgctaaacctcacttcccagggtcctcagctgtccctgaaactgccccgatg
ttgcagactgtcttagtgaaaagaagcacgccggttattgtccgcagtgactccctcaaa
cctaggggctggagggattcaagccgcggggaaccaaaccaactgcaaagcctagagatc
ccttctcctcagggggaaagacaagcatgcacaccagcagagacacagaccaaagatagt
gaatccaatccagagccattggagtgccacagccagaaagagacatcctcactgtcgtcg
tcgctcgttgctcagtcgagcacagatgtcctcagagctgagtgcgaaccgaacctgagc
gaggacagcactgtggcaggagtgacagagccggactcagtgccaaagatctcgactccc
tctctggatggtagctccaccttgtcctgcagctcagagagcactcgctcctctttttct
tttgacactgaatcagaggcagggtatggagaacccagcccctctgttctacccagatcc
tgggggccagaaggggccggcatgccctcctggactgctccaaaaccacataagaaagag
aggaagaagcggagcaggtgtgggacatgtgagccatgcctgaggaagatcagctgtggt
cagtgcagctgctgcctcaaccgcaggactggccaccagatctgcaagctgaggaagtgt
gttgaactgaaaagaagaagaccttcgtctccgctcattcccaccactgcacaggtggtt
ccagaaagtgggtcagtaaatggcaaaggcaaggcacagatggatgacacccacacggca
gcagaggaggatgagggggaggaaggccacatacctcatacacaatctccccccatcaac
cattcgctcacccacaacctggcctcggaccaagccggatggccagcacttattaaaaga
gagcccgggttggagctgaccagcattgcacttcaccaacatgtatgctcttctgtgggt
tttcagaatggttctactgagaacctgacaaaacctaacggtgctaatatgaccactggg
tcacactctgatctgaagtctgcttttaaaagaactgcgatggcatcagagcctcaaacg
tcaataatagctacaattcctaaggactgctctgagaacggacccaagactcctccagat
gacatgtcagttccactaaagaagatcaagctggaggagccgtgggtgtggatcactgaa
caagccaccacacagctgagtgatgaagatgaggtctgtgaaaacccgctgtccacactg
gcggctgtggtttgtctttctgtcagggagaggaagggattggaagagaaactcttctgc
tcacgttcttccattcttcgctccatcaaaacggaaccaccagatttgcacttcgtcaaa
aaagagccaggggacttaaagaatgacttgtgtcagaaaagcactcctgttagccagcaa
aagactccccagcctatgaaaagtgaacctcctccaagtatcttgctaccaagcgtgcag
tctttggcagagaagagaaatcttagttttgatcaggctattgctattgaggccttgact
cagctggcagctatacctgaaagtaccccagggtccattaaagctgaaagtaagtgtgaa
catcccatttctactgctgccccattttcaacctccagcacaaatacaaccctgcaagag
gccaaacccacagcagctatctgctacaacaaagtctcggtcataagctcaccactacac
cagatgtcagtcatacgccctcctgtggccagacaagggaatgtcatccaatgctcccgg
gggtcgaactctaacacaaagctgtctctgcaggatctcttagaggccagttcagacagt
gataaagcaccctgcaggaggacagagcagggctttggttctcatttcatcaagtctgaa
agcagctataaacatcccagtgatatgaagttcagtaaagatcatgagcggttgtttggg
acagaggacagagacggggttggtaaagcaaggagaaacagagatgaggaggaggtggca
gctcagctggcagacctggcctttatcatccagtcccgtcaaagccagcaatcagagaac
aaccctccaaaaggagcaccagtgtcggccatcaaatacaactacaactcacagctatcc
cccagtcagaaaaaggcccttgtgaaaaaagcaaaagctacacctcccaagcccagaaag
aagaagataagtgatggactacacgagggggtcaaccgcaggacccccctctcaaaacgc
atgccaaatggagagatgcccaacagaggcagaggccagaagattcttccacaggggaag
tcaggccttcaccacaagaggaacctgtttttgcctcaggctcaaattgacctgaagaga
tacttggctgaggctcaggaggaaaggaggcaactcatccatcacagtaactcacacaat
acagccctcatagggccacagactcagaactacaccactctcacgaggatcaaccacact
tgtggacaagaaaatcagccatggtccctttcgaatggtccactccaccaacataatcca
tgcaatggtcatgctgcaggaccggagcaggagtgcgaaaggcatttgttatctcaggta
gcgcagccctgtggtgggctgcagcatggtgctgatcctaacaccagctcagccagtacc
gctctcctcagccacaccactgggcaccatggtctggctaatggcttctcaggggctcga
cagtcccctcctccaagccagcagagctactacaagctggagaggtcaggacctgtcact
gtcctgtccacagctactgatggggatatgggccactctgcagagtcaactccatccaag
aacagcgtcaacagctttctagagtctccaatgagttttctggatacccctaccaagaac
ttgctcaatactccttccaaaaaactggctgaccttccatcctgtcaatgcatggaccaa
atcattgagaaggaggagggcccgtactatactcatcttggggcaggacctagtgttgct
gcagtgagagaactgatggaaaacaggtatggtgccaaaggaagtgcagtaagggtggaa
gttgttgtttacactgggaaagaaggaaggagctctcaggggtgtccaattgctaaatgg
gtgatccggcgtggcagtgaagaggagaagctgctgtgtttggtccgccagaggccaggg
cactactgtgatgccgccgtgttggtgatccttatcctggcttgggagggaatccctcgg
cctgtggcggatcacctctaccaggagctcacggagacactttttaaatacggctccccc
accagccgtcgctgcgctctcaatgaagatcgtacgtgtgcgtgccagggtctggaccca
gacacttgtggagcctcattttcctttggctgctcctggagtatgtacttcaatggctgt
aagtttgcccgcagcaaagtgccccgcaagtttcgcctgcttggagactaccgggaggag
gaggagaaaatagagaacaaccttcagaatcttgccactgaccttgcacctctctacaaa
agactggcgcctgaggccttccaaaaccaggtggaacatgaggagacaggttgcgaatgt
cggctgggaaggaaggagggacgtccgttttctggggtcactgcctgtgtggatttctgt
gctcacgctcacaaggacactcacaacatgaataacggcagcactgtggtttgcacttta
accaaggaagataaccgtgcagtgcgtaacataccacaagatgagcagctccacgttctg
ccactttacaagatctctgacagggatgagtttggtcaggttgaaggccagtgggccaaa
atccaaagtggtgctctgcaagttctgtcttccttcccccgtgaggtgcgtctgctggct
gagccggtgaaatcagcacggaagataaggcaagaagctcgtctgaaggcccaggcagag
agactggagaagaaactcgggttggcgcctctcactcctgggaaaatgaaaaacgatacc
cccaacaaagagccacagggctactacagctcatacagaataccacccagacctgccagt
gtcggtaggtatctaccggagaggaaccaacacagcacttacagccagagcaccagcagc
tatcccactccaggtgcaggagtcaccccacagggggaggtcatctcccccaaccaccac
agcttgcctggcctccagtttggacagaatggctcagctctcagttataaaacaatgagt
gacagcgtgaatggttattctccagcatctggtgaccagagtgtccactcagaacgtata
cctccacataatgtccttagtgactacccctgtacttttaaaactgagcccaataaggtg
cactgctcttctctgtgcagaccctcccccagcgggagtgctcctcctccctcctccttc
tccccgagacctacctctgagggcctcttcagtaggctcaacggactccacagggctgca
ggagatgtcacggcagaggtcaggggtcacggcctccctccgctctcatctctccctctc
cccttacaaactcctccacttgaaccagaggaagttaaacaggaagaagtgtggtcagac
agcgagcacaacttcctggaccacaacataggcggagtcgctgtggcaccctcgcacggt
tccatcctgatagagtgtgcgcggcgggagctccacgccaccacccctatcctcaggcca
aaccgcagccaccccacacgcatctctctggtcttctaccagcacaagtctctaaatgag
ccaggccacgggatggctatgtgggatgccaaaatggccaagagggagcgggacagggaa
gaggaggctgagagattaaggatggaagacagcctgaacaacggcaatggagctagaggt
gcggagctagaggaggagggaggggagaaggcagaggaggcaaggaggatcatgaatgtc
cccacacgtcaaacatggactctcccgagggatggcgtcatcaccgtgtccccttatgct
cttacccaagtgacgggcccctacaatcgctggacttag

DBGET integrated database retrieval system