Leucoraja erinacea (little skate): 129697007
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Entry
129697007 CDS
T09122
Symbol
extl3
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
leri01100
Metabolic pathways
Module
leri_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
129697007 (extl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
leri01003
]
129697007 (extl3)
Enzymes [BR:
leri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
129697007 (extl3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
129697007 (extl3)
Glycosyltransferases [BR:
leri01003
]
Glycan extension
O-Glycan
129697007 (extl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
MscS_porin
ADIP
TPR_MLP1_2
DUF1664
Seryl_tRNA_N
Noelin-1
Motif
Other DBs
NCBI-GeneID:
129697007
NCBI-ProteinID:
XP_055491165
LinkDB
All DBs
Position
5:complement(20071581..20126267)
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AA seq
914 aa
AA seq
DB search
MLRNGGVGNVGQPCMLRWSNRIRLTWLSFTLFIILVFFPLIAHYYLTTIDNLDDSGPRIF
EPRSGNALCEVKHVQDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKIELCKKSIENAK
QDLLQLKNVISQTEHSYKELVAQNQPKLSLPIRLLPEKDETNFPLPKSPNSCRLYSCFDY
SRCPLTSGFPVYIYPLDLYQFSSFIDPLIKQAFQATARTNVYVTNNPHVACVYVVLVGEV
QDSSGLKSIEIEKQLHSLPYWRSDGHNHLLINLSRRSQTQNLLYNISTGRAMVAQSTFYD
VQYRPGFDIIPSPLIHAMSEPNFLEIPPQVPVKRKYLFSFQGEKLESLMSSLQEARSFEE
EIEGNAPADYDDRIIATLKAVQDSKLDLVLVEFTCKNQPRLALPTEWALCGERDDRLELL
KLSSFVLIITPGNAHLVASAGCSMRLFEALEVGAIPVILGEHVQLPYHDMIHWSEVALVV
PKPRITELHFLLRSISDSDLLNMRRQGRFLWETYFSTSDNVLSTILSTVRTRIQIPAAPI
AEEPSKEIPHKTGKAAGTDPNMADTGDLDLGPVETEPPYASPKYLRNFTVTVRDTYRAWN
AAPGPFHLFPHTPLDPTLPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPREQFTV
VMLTYEREEVLMNSLERLNGLPYLNKVIVVWNSPKPPSEDLVWPEIGVPIVVVHTDKNSL
NNRFLPWDTIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDMTHQSW
LYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHITR
KPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLFK
TRLPHDKTKCFKFI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgctacggaacggaggtgttgggaatgttgggcaaccgtgcatgctacgatggtccaat
cgcatccggttaacctggctcagcttcaccctgttcatcatactggtcttcttccctctg
attgcccattactacctgaccaccatcgacaaccttgatgactctggcccgcgcatcttt
gagccgcgctccggtaatgccctatgcgaggtcaaacatgtacaggacctgtgccggatt
cgggaatcggtcagcgaggagctgcttcagcttgaggccaagcggcaggagctcaacagt
gaaatcgccaaacttaacctgaagattgagttgtgcaagaaaagcattgagaatgccaag
caggacctgcttcagctcaagaatgtcatcagccaaaccgagcactcgtacaaagagctg
gtggcgcagaaccagcccaagctctcgttgccaatccgcctcttgccagagaaagatgag
accaacttcccattgccaaagtcccccaatagctgtcgcttgtattcttgttttgattac
tctcggtgcccactgacgtctggatttccagtttatatctacccactggatctgtatcaa
ttcagcagttttatcgatccattaattaaacaggcattccaagcgactgctcggactaac
gtctatgttacaaacaatccccatgttgcctgtgtctatgttgtcttggtcggggaagta
caagattcctcgggactgaaatccattgaaattgaaaagcagttgcactccctcccttac
tggcgatccgatggacataatcatcttctcattaatctatccaggaggtcccagactcag
aatctgctgtataacatcagcacaggcagggctatggttgcccagtctactttctatgat
gttcagtatcggcctggctttgatatcatcccatcaccccttatccatgccatgtccgag
cccaactttttggagattccgccccaagtccccgtcaaaaggaagtatctcttcagcttc
caaggagagaagctagaatcgctcatgtccagtttgcaggaggctcgttcgtttgaggag
gagatcgagggcaatgctccagcagattatgatgatcggattatcgccaccttgaaagca
gttcaggacagtaagttggatttggtccttgtggagttcacctgtaagaaccagcctcga
cttgctttaccaactgagtgggcgctttgtggtgagagggacgataggctagagttgttg
aaattgtcctcctttgtattaatcataactccgggaaacgcccaccttgttgcctctgct
ggttgttccatgaggctttttgaagctttggaggttggtgccattccagtaatccttggg
gaacacgtgcagttaccctaccatgacatgatacactggagtgaagtggctctggtggtg
ccgaaaccacgcattactgaactgcatttcctcttgagaagcatctcagacagcgatctg
cttaacatgagacgtcagggccgcttcctgtgggagacttatttttccacttcagacaat
gtactgagcaccatcctgtccactgtgcggacacggatacaaatccctgcagctcccatt
gcagaagagccatctaaagagatccctcataagactggaaaggctgctggtactgatccc
aacatggccgacacaggtgacctggacttggggcccgtcgagactgagccaccttatgcc
tcccctaaatacttgcggaacttcacagtcacggtccgggacacttaccgagcctggaat
gctgcaccaggacctttccacctctttccgcacacgccacttgaccccaccttgccctct
gaggccaagttcctcggatctggaaccggattccgaccgataggtggcggagctggaggt
tctgggaaggagttccaggctgctctaggcgggaatgttcccagggaacaatttacagtc
gtaatgttgacctacgagcgtgaggaagtcctgatgaactctttagagaggctaaatggt
cttccttacttgaataaagtcattgtcgtatggaactctcccaagccaccatctgaggac
cttgtgtggcctgagatcggagtgcctattgtggttgttcacactgataagaatagttta
aataatcgtttcctaccttgggatactattgaaactgaggcaattctttctattgatgac
gacgcccatcttcgtcatgacgagatcatgtttggctttcgggtttggcgagaggcaaga
gatcgaatcgtgggttttcctggcaggtatcatgcctgggatatgacccaccaatcctgg
ctgtacaattccaactactcctgtgaactctccatggtactgacgggtgctgccttcttt
cacaagtactatgcgtacttatactcctatgtcatgccacaggccatccgagacatggtg
gacgagtacattaattgcgaggatattgccatgaacttcctcgtctcccatattacccgg
aagccaccaataaaggtcacatcacgttggacattccgttgcccaggttgtccccaggcg
ttatcgcatgatgactcccacttccacgagaggcacaagtgcatcaacttctttgtgaaa
gtatatgggtacatgccgctgctttacacccaattccgtgtggactctgtattgttcaaa
acacgcctaccacatgacaagaccaagtgttttaaatttatctga
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