Leguminivora glycinivorella (soybean pod borer): 125239890
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Entry
125239890 CDS
T09956
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125239890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125239890
04121 Ubiquitin system [BR:
lgly04121
]
125239890
03036 Chromosome and associated proteins [BR:
lgly03036
]
125239890
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125239890
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125239890
Ubiquitin system [BR:
lgly04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
125239890
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125239890
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
125239890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
BRCT
zf-RING_6
BRCT_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125239890
NCBI-ProteinID:
XP_048003613
EnsemblRapid:
ENSLGLG00000011936
LinkDB
All DBs
Position
26:11131893..11133883
Genome browser
AA seq
523 aa
AA seq
DB search
MSKKDYNNLIKALDDMNKCLFCVECHQFCKNPVTLSKCFHLICSEHFQDLSNCPKCKVSL
NDCTTWSDDKLNDAVHAAKNLSAMFELSKENKPCDSVEESPGKAVNKISESLPDTPLLNE
ILAPKRTPAAKQDVLNNSTLSLASNISKSGKTVEKRNNKGETALHIACRMGKADKVAKLL
SEGASTNTKDNAGWTPLHEVVQNGRQDLLKLLLRHNTLVNVPGQGNETPLHEAIRYNYIE
IAKDLVAHGADINARNCKGETPLSLATPEIAAIMKDIAEKRFITEDTLDSDLIQKQIELD
YEDIKVFCVSQSRSVTNKLKALTKHHSNLHVEQKFSNKVTHLIVDAEDGICDSSLEVLQG
IVNNLWILTSKWVTASTDYNLASFEEYEVLGVSTTTYRGPKNARYNKYKLLPGIFNGCHF
YFHSFNTKYKISDKIEVTKAILSKLVTDAGGIALRRAPNPESIPESEKLIPYHAQRDGKL
YNCSHYIIYKDMYEPLYNMAHLKALPIGWLIECIEKYQLCEPW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaggattataataatttgataaaagctctagatgatatgaacaagtgttta
ttttgtgtggaatgccatcaattttgtaaaaatccggtgaccttaagcaaatgttttcat
ttaatatgttcggaacatttccaggatttgtcgaattgtcccaagtgtaaagtatctctc
aatgattgtaccacttggtcagacgataaattgaacgatgcagttcacgccgcgaagaat
ttgtcggcaatgtttgagctttccaaggaaaataagccttgcgattctgttgaagagtct
ccagggaaggcagtgaataagatcagtgaatcgttgccggacactcctctactgaatgag
atccttgctccgaagcgcacccccgcagccaaacaggatgttctaaacaattcaacatta
tctttagcttctaatatatccaaatcaggaaaaacggtagagaagagaaacaacaaaggt
gagacagcattacacatagcctgcagaatgggcaaagctgataaagtagccaaactttta
agtgaaggagcaagtacgaacacgaaagataatgctggctggactccattacatgaggtt
gtgcagaatggacggcaggacttactaaagcttttattgaggcacaatacgctagtgaat
gtcccgggacagggcaatgaaacccctcttcatgaagccatccgttacaactacattgaa
attgcgaaagatctagttgctcatggagccgacattaatgccagaaactgcaaaggcgaa
acacctcttagcctcgctaccccagagatagcagctataatgaaagatatagctgagaaa
aggtttattacagaagacactttggattcagaccttatccagaaacaaattgagcttgac
tacgaagatattaaagttttctgtgtctcacagtctcgctccgtcaccaacaagctgaaa
gccctaacgaaacatcacagcaacctccatgtcgaacaaaaattcagtaacaaagtcaca
catctcatagttgacgcagaagatggcatttgtgactcgagccttgaagtcctgcaaggc
attgtcaataatttatggattttaacttctaaatgggtgacagcatctactgattataac
ttagcatccttcgaagagtatgaagtgctcggtgttagtacaactacatatagaggccca
aaaaatgctcgctacaacaagtataagctgctgcctggtatttttaatggctgtcacttt
tacttccatagcttcaatacgaaatataagatttcagataagatagaagttacgaaagct
attttaagtaagctggttaccgatgcaggaggaatagctcttaggagagctccgaatcct
gaatctataccggaatcagagaaactaattccgtaccatgcacagagagacggtaaactg
tacaattgttcacattacattatatacaaggacatgtatgagccactctacaacatggcg
catttgaaggctctgcccatcggctggctcatcgagtgcatcgagaaatatcagctttgt
gaaccttggtga
DBGET
integrated database retrieval system
