Lysobacter gummosus: LG3211_4541
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Entry
LG3211_4541 CDS
T04163
Name
(GenBank) D-ala-D-ala dipeptidase family protein
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu01502
Vancomycin resistance
lgu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LG3211_4541
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LG3211_4541
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgu01002
]
LG3211_4541
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgu01011
]
LG3211_4541
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
lgu01504
]
LG3211_4541
Enzymes [BR:
lgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
LG3211_4541
Peptidases and inhibitors [BR:
lgu01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
LG3211_4541
Peptidoglycan biosynthesis and degradation proteins [BR:
lgu01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
LG3211_4541
Antimicrobial resistance genes [BR:
lgu01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
LG3211_4541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
ALN93475
LinkDB
All DBs
Position
complement(5079215..5079931)
Genome browser
AA seq
238 aa
AA seq
DB search
MIGCVAAVRSPDAQAPAAAAADKPVAPQVSNAADAASAGMVEIRSLVADMSMDIRYAGSD
NFVGRPVDGYRAAGCYLHRDVAQALARVERELRPQGLRLHIYDCYRPVRAVRDFVRWAGD
LSDQKTKSRYYPKLDKRVLLGDYISPSSGHSRGATLDLGLMESQAGGDRIADMGTGFDYF
DERAHTDSPGITAAQRANRQRLRAAMQREGFENYPLEWWHYTYKPEPTPATAFDFPVE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggttgcgtcgccgcggtgcgctcgcccgatgcgcaggcgccggccgcggccgcc
gcggacaaaccggtggcgccgcaggtgtcgaacgccgccgatgcggcctcggccggaatg
gtcgagatccgctcgctggtggcggacatgtcgatggacatccgctacgccggcagcgac
aacttcgtcggccgcccggtggacggctaccgcgccgccggctgctatctgcatcgcgac
gtcgcccaggccttggcgcgggtggagcgcgaactgcggccgcaggggctgcggctgcat
atctacgattgctaccgcccggtgcgcgcggtccgcgatttcgtgcgttgggccggcgat
ctgagcgatcagaagaccaagtcgcgctattacccgaagctggacaagcgcgtgctgctg
ggcgattacatctcgccgagctcgggtcacagccgcggcgcgaccttggacctgggactg
atggagtcgcaggccggcggcgaccgcatcgccgacatgggcactggcttcgactatttc
gacgaacgcgcgcataccgattcgcccggcatcaccgcggcgcagcgggccaatcgccag
cgcctgcgcgcggccatgcagcgcgaaggtttcgagaattatccgctggagtggtggcac
tacacctacaagcccgaacccaccccggccacggcgttcgatttcccggtcgagtga
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