Linepithema humile (Argentine ant): 105670581
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Entry
105670581 CDS
T04898
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lhu01009
]
105670581
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105670581
04131 Membrane trafficking [BR:
lhu04131
]
105670581
03036 Chromosome and associated proteins [BR:
lhu03036
]
105670581
Enzymes [BR:
lhu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105670581
Protein phosphatases and associated proteins [BR:
lhu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105670581
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105670581
Membrane trafficking [BR:
lhu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105670581
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105670581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105670581
NCBI-ProteinID:
XP_012219596
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MAESAVSSDLFTAAKQLADSEIELIKTIENSSACQRSVTNMFASVKKTKKSGKSRNVRPS
AALLAAKRQAAQRQLLEKKSSNNFVMDIYQRALDTYKMMRKETGLVFDRSMAEHECLWDP
NYSECPARFTRVLQRCEDLGLVQRCKLIEPRMATESEILTKHSQKQIDILKATDGCADSE
NLELLSSKYDCVFVHPSTYKLSLLAAGSAINLVESICKGEVQNGMAIVRPPGHHAMESEY
CGYCFFNNVAIAATAALNSNLASRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGE
FWPNLRESDFHYVGENLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPNLVIVS
AGYDAALGCPEGEMLVTPACYAHLLSSLLSLAAGKVAVILEGGYCLKSLAEGAALTLRTL
LGDPCPILQTLDLPSSSIRDTILNVIYAHRPYWKCYQYQDTHSVNSVTHNKEEIANRHVI
IVTYKGSEVKPDKYDTRNCYPVQSTEVFDAMDKKLNDLILFTNLRKAPHKVCIVYDDKMQ
KHCDISDNTHPEKPVRISSIYKSHEEHGLLERCYLLQGRSATMEELCLVHSKDYIDSIKR
TSTLKLKELQKQASDYNSVYLHPDTWSSACISAGSLLQVVDAVLNGESQSGVAIIRPPGH
HAEEDTACGFCIFNNVAVAATYAVQFHHLKRVLIVDWDVHHGNGTQSIFEEDPKVLYISV
HRYDNGSFFPNSKAANYTSVGLNAGERFNVNIPWNKKGMGDAEYIAAFQQVVMPIAYQFN
PELVLISAGFDACIGDPLGGCQVSPELYGHLTHWLSSLANGRVILSLEGGYNINSISHAM
TMCTKSLLGDPLPVLDPGLIPCTSAINSINNVLKTHKRFWPNLQYGMSLPKENILPKLKT
ANKLEEQGRNVEKQKRTESKIALEVIESEKLELNLAIDKNCLNLVTDEEILKLTNEVENI
KIKNSELDAGRSEAGEITRSSRKSEAKSLDVSQSIQQCVNESNQPRSSQQRSSSTHESRD
DEGAASLQPETRSTLMEYLSDNLQALTAGEMFAVMPLRDCPHLFTVNEVPSGGIDVTAPC
MECVSTAENWICLQCYTVHCARNVNQHAMQHAEECEHPITLSFSDISVWCYGCEAYIDNP
RLYAARNAAHQSKFNEELPWTYSETSVNVS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctgcagtgagctcagatttatttactgctgccaaacagttagcagacagc
gagattgagcttataaagacaattgaaaattctagcgcatgccaaagaagtgttacaaat
atgtttgcaagtgtaaagaaaacaaaaaaatctgggaaatcaagaaatgttcgtccgtca
gccgcgctattggctgctaaacgacaggcggcgcagcgacagttgttagagaagaaatcc
agtaataacttcgtaatggacatataccagagagcactcgatacgtacaaaatgatgcga
aaggaaactggcctcgtgtttgatcgaagcatggcagaacacgaatgcctttgggatcct
aattattccgagtgcccagccagatttacgcgagtcttgcagagatgcgaagatttgggc
ctggtgcagcgatgtaagcttatcgagccaagaatggccacagaaagtgagatcttgacg
aagcacagtcaaaagcaaattgacattctgaaagcgaccgatggctgtgcggattctgag
aacttggagttgctgtcctccaaatatgattgtgtttttgttcatccgtctacgtacaaa
ttatctttactggctgcgggctcggcgatcaatttggtagaaagtatttgtaaaggcgaa
gtgcaaaatggcatggctatcgtcaggccaccaggtcatcatgcaatggaatcggagtac
tgcggttattgcttcttcaacaatgtagctattgcagcgacggcagctttgaattctaat
ttggcgagtagaattttaattgtggattgggatgttcatcacggacaagcgacgcaacaa
atgttttacaatgatccacgtgtagtctatttttcgatacatcgttatgaacatggcgaa
ttctggcctaatctgagggaatctgactttcattacgttggagagaatctcggagagggt
tacaattttaatataccattaaataaaactggaatgacgaacgctgattacatagcaatt
ttccaacaagttttattgccaatggcttacgaatttcaaccgaatttggtaattgtgtca
gctggttatgatgcggctctgggttgtccagagggtgagatgctggtaactccagcgtgt
tatgcgcatttactgtcgtcactattgagtctggcagctggaaaagtcgccgtgatttta
gagggtggttattgcctgaaatctttagcagaaggtgcagctttgaccctaagaacttta
ttgggcgatccgtgtcccattttacaaacactcgatttaccatcatcaagtatacgggac
actattttgaacgtgatctatgcacacagaccgtactggaagtgttatcagtatcaagat
acgcatagtgtcaatagtgtaactcacaacaaagaggagattgccaatcgacatgtaatt
atagtcacgtacaaaggcagtgaagttaaaccagacaaatacgacactcgaaattgctat
cctgtacagagcacggaggttttcgatgccatggacaaaaagttgaacgacctgatacta
tttacaaacttgcgcaaagcgccgcataaagtgtgcattgtctacgatgataaaatgcag
aagcattgcgacatttctgacaacacacatccagagaaaccagttcgcatctccagcatt
tataagagtcatgaagagcatggcttgctggaacgatgttatttgctacaaggaagaagc
gcaacaatggaagaattgtgcttggttcattcgaaggattacatcgacagtatcaagaga
acatcaactttaaaactcaaggagttacagaaacaagcatcggactacaattccgtgtat
cttcaccctgatacgtggtcgagcgcttgcatatctgctggctctcttttgcaagtggtg
gacgcagttttgaatggggaaagtcaatccggagtggccatcataaggccgcctggtcac
catgccgaagaagacactgcgtgtggattttgtattttcaataacgtggcggtggctgca
acttacgctgtacaatttcatcatctaaagagggtactgatagtagactgggacgtgcat
cacggaaacgggacgcaatctatattcgaggaagacccgaaagttctttacatctccgtt
catcgttacgacaacggcagcttctttccgaactcgaaagcggccaattacacgagcgtc
ggtttaaacgcgggcgaaagattcaacgtaaacataccgtggaacaagaaaggaatggga
gatgcggaatatatagctgctttccagcaagtcgtgatgcccatcgcttatcaatttaat
ccagagctagtcttgatttctgctggattcgatgcttgcataggcgatccactcggaggc
tgccaagtgagtccggagctctacggccatttaactcactggctctcatctctggctaac
ggtcgcgtaatcctcagtcttgagggaggctataacatcaattccatctcccacgctatg
accatgtgcaccaagagtctgctgggcgatcctctgcctgtgctggatcctggtctgatc
ccctgcactagtgcaatcaattccattaacaacgtgctgaagactcataagagattctgg
cccaatctgcaatatggaatgtccttgccgaaagaaaatatacttcccaaacttaagaca
gccaataaacttgaagagcaaggaagaaacgtggagaagcagaaacgcaccgaatcgaag
atcgctttggaagtaatcgaaagtgagaaactggagttgaatttggcgatcgataagaac
tgtttgaatctcgtgacggacgaggagattttgaagctgacgaacgaagtggagaacatt
aaaattaagaattccgaactggacgcggggagaagtgaagcgggcgagatcacgaggagt
tcgagaaagagcgaggcgaaaagtttggacgtttcacagagtatacaacaatgcgtaaac
gagtcgaaccagccgagaagcagccagcaaagaagttccagcacacacgagagccgcgat
gacgagggtgcggcatctctgcaacctgaaacgcgttctaccctcatggaatatctctct
gacaatcttcaggcactgacggcaggggaaatgttcgcagtgatgcccttgcgagactgt
ccgcacttatttacagtcaatgaggttccttcgggcggaatcgacgtgactgctccgtgc
atggaatgcgtcagtaccgcggagaattggatctgcttacagtgttacactgtgcactgc
gctcgtaatgttaatcagcacgccatgcaacatgcggaggagtgtgaacatcccattaca
ctcagcttcagcgatatttctgtctggtgctacggttgtgaggcgtacatcgataatcct
cgattgtacgctgcaagaaacgcggctcatcaaagcaagttcaatgaggagcttccttgg
acttatagcgaaactagcgtaaacgtatcttaa
DBGET
integrated database retrieval system
