Lichenihabitans sp. PAMC28606: LGH83_06405
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Entry
LGH83_06405 CDS
T07621
Name
(GenBank) M15 family metallopeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz01502
Vancomycin resistance
liz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGH83_06405
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LGH83_06405
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
liz01002
]
LGH83_06405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
LGH83_06405
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
liz01504
]
LGH83_06405
Enzymes [BR:
liz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
LGH83_06405
Peptidases and inhibitors [BR:
liz01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
LGH83_06405
Peptidoglycan biosynthesis and degradation proteins [BR:
liz01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
LGH83_06405
Antimicrobial resistance genes [BR:
liz01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
LGH83_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
UDL95828
LinkDB
All DBs
Position
1329593..1330198
Genome browser
AA seq
201 aa
AA seq
DB search
MTNDPHAVVPPPGFVDLTETDGIVVDLRYASTNNFVGRVIYDGFDRLMLHEIAAAKLISA
IVALRQIRPDLRLLVFDGFRPNRVQRLFWAVVRGTAEQQFVADPAIGSVHSFGLAVDLSL
IDAAGRALDMGTDFDDFTERAEPRREADLLAQGALSELQVRNRMLLRTVMEAAGFLHLPI
EWWHFDALPADQVRRLFSLIE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgatcctcatgcggtcgtgccgccgccgggcttcgtcgacctgaccgaaacc
gacgggatcgtcgtcgatctccgctatgcctcaacgaataatttcgtcggccgcgtcatc
tacgacggcttcgaccggctgatgctgcatgaaatcgcggccgccaagctaatctcggca
atcgtcgcattgcgtcagatccgccccgatcttcgcctgctggtttttgatggctttcgc
ccgaaccgagtccaacgtctgttctgggccgtggtgcgggggacggcggagcagcagttc
gtggccgacccggcgatcggttcggtgcacagcttcggcctcgcggtcgatctttcgctg
atcgatgcagccgggcgcgcgctcgacatggggacggatttcgacgatttcacagagcgg
gctgagccgcggcgtgaagccgacctgctggcccaaggcgcgttgtcggagcttcaggtg
cgtaaccgcatgctgctcaggaccgtgatggaagccgcaggctttcttcatctgccgatc
gaatggtggcatttcgatgcgctcccggccgaccaggtgcggcggctcttcagcctcatc
gagtag
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integrated database retrieval system
