Lutra lutra (Eurasian river otter): 125080472
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Entry
125080472 CDS
T08100
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv02010
ABC transporters
llv04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125080472
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
125080472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llv02000
]
125080472
Enzymes [BR:
llv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125080472
Transporters [BR:
llv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125080472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_5
AAA
AAA_29
G-alpha
AAA_14
AAA_15
AAA_7
SbcC_Walker_B
AAA_28
PRK
AAA_30
DUF815
NTPase_1
DUF2207_C
Peptidase_MA_2
DUF2336
Motif
Other DBs
NCBI-GeneID:
125080472
NCBI-ProteinID:
XP_047550294
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All DBs
Position
11:complement(31669549..31735648)
Genome browser
AA seq
1280 aa
AA seq
DB search
MDLEAGRNGTVPRPGRAEGDFELGPSSNQDKKKKRMNLIGPLTLFRYSDWQDKLLMSLGT
IMAIAHGAGLPLMMIVFGQMTDKFIDTAGNFSFPVNFSLSMLNPGRILEEEMTRYAYYYS
GLGAGVLVAAYIQVSFWTLAAGRQIRKIRQEFFHAILRQEIGWFDINNTTELNTRLTDDI
SKISEGIGDKVGMFFQAVATFFAGFIVGFVRGWKLTLVIMAISPILGLSAAVWAKILSAF
SDRELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYEKHLENAKRIGIKKAISANISM
GIAFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILVGAFSVGQAAPCIDAFANAR
GAAYAIFNIIDSNPKIDSFSERGHKPNSIKGNLEFIDVHFSYPARADVKILKGLNLTVES
GQTVALVGNSGCGKSTTVQLIQRLYDPDEGRINIDGQDIRTFNVRYLREIIGVVSQEPVL
FSTTIAENIRYGRGNVTMDEIKKAVKEANAYDFIMKLPQKFDTLVGDRGAQLSGGQKQRI
AIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADIIA
GFEDGVIVEQGSHGELMKKEGVYFKLVNMQTSGNQVQSGEFDLELNNEKAAVDMTPNGWK
SSLFRNSTRKSLRNSWKYQNGLDVEAKELDENVPPVSFLKVLKLNKTEWPYFVVGTVCAI
ANGALQPAFSIIFSEMIAVFGPGDDDVKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGKA
GEILTSRLRSLAFRAMLRQDMSWFDDHKNSTGALSTRLATDASQVQGATGMRLALVAQNT
ANLGTGIIISFIYGWQLTLLLLAVVPIIAVSGIVEMKLLAGNAKRDKKELETAGKIATEA
IENIRTVVSLTQERKFELMYVEKLYGAYRNSVRKAHIYGITFSISQAFMYFSYAGCFRFG
AYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFMLLERRPLIDS
YSEEGLRPDTFEGNVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVV
QLLERFYDPVAGAVLLDGQEAKKLNIQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVV
SQDEIVNAAKAANIHPFIETLPHKYATRVGDKGTQLSGGQKQRIAIARALIRQPQILLLD
EATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGKVKEHGTHQQL
LAQKGIYFSMVSVQNGKQNL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggcgggaaggaacggaaccgtcccacgccccgggagagcggagggcgac
tttgagctgggccccagcagcaaccaagacaagaaaaaaaagagaatgaacctgattgga
ccattaactttgtttcggtattctgactggcaggataaattattgatgtccctgggcacc
atcatggccatagctcatggagcaggtctccccctcatgatgatagtatttggacaaatg
actgacaaattcattgatactgcaggaaacttctcctttccggtgaatttttcattgtca
atgctaaatccaggcagaattctggaagaagaaatgactaggtatgcgtactattactca
gggttaggtgctggagttcttgttgctgcctatatacaagtttcattttggactctggca
gccggccgacagatcaggaaaatcagacaggagttttttcacgctattctacgacaagaa
ataggctggtttgatatcaacaacaccactgaactcaatacacggttaacagatgacatc
tccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcagtagccacg
ttttttgcaggattcatagtaggattcgttagaggatggaagcttacccttgtgataatg
gccatcagccctatcctgggactctctgcagctgtctgggccaagatactctcggcattt
agtgacagagagctagccgcatatgccaaagcgggcgccgtggcagaagaggctctgggg
gccatcaggaccgtgatagcctttggaggccagaacaaagagctggagaggtatgagaaa
catctagaaaatgccaaaaggattggaattaaaaaagctatttcagcaaacatctccatg
ggcatagccttcctgttaatatatgcgtcatatgcgctggccttctggtacggatccact
ttggttatatccaaagaatatactattggaaatgcaatgacagtctttttttcaatcctg
gttggagccttcagcgttggacaggctgctccgtgcattgacgcttttgccaacgcaaga
ggagcagcctacgcgatcttcaacatcattgatagtaatcctaaaattgacagtttttca
gagagaggacacaaacccaacagcatcaaagggaacttggagttcattgatgttcatttt
tcttatccagctcgagctgatgtcaagatcttgaagggcctcaacctgacggtggagagc
gggcagacagtggcgctggtcgggaacagcggctgcgggaaaagcacgacagtgcagctg
atacagaggctctatgaccctgatgagggtaggattaatattgatgggcaggatattagg
acctttaatgtaagatatctcagggagataattggagtggtgagtcaggagccagtgctc
ttttctaccacaattgctgaaaatattcgttatggccgtggaaacgtcaccatggatgag
ataaagaaagctgtcaaagaggccaacgcctatgacttcatcatgaaactaccacagaaa
ttcgacaccctggttggagacagaggggcccagctgagtggcggacagaagcagaggatc
gccatcgctcgggccctggttcgaaaccccaagatcctcctgctggacgaggccacgtca
gccctggacactgaaagcgaagcagaggttcaggcggccctggataaggcaagagaaggc
cggaccaccatcgtgatagcccatcggctgtccaccatccgaaacgcagacatcatcgct
gggtttgaagatggcgtcattgtggagcaaggaagccacggggagctgatgaagaaggaa
ggcgtgtacttcaagcttgttaacatgcagacgtcaggaaaccaggtccaatcaggagaa
tttgaccttgaactaaataatgaaaaggctgccgtggatatgactccaaatggctggaaa
tctagcctatttaggaattctactcgtaaaagccttaggaattcatggaagtatcagaat
ggccttgatgtggaagccaaagaacttgatgaaaacgtgccgccggtgtcttttctgaag
gtcttgaaattgaataagacggaatggccgtactttgtggtcggcacagtgtgcgccatt
gccaatggggccctgcagccggccttttccatcatattctcagaaatgatagcggttttt
ggaccaggggatgatgacgtgaagcagcagaaatgcaacatgttctcattgcttttttta
ggtctgggaattatttcctttttcactttcttccttcagggcttcacatttgggaaagct
ggcgagatccttaccagcaggcttcggtcgttggcgtttagagcaatgctgagacaggac
atgagctggtttgatgatcataaaaacagtactggtgcactctctaccagacttgcaacg
gatgcctcccaggtccaaggagccacggggatgaggttggcgttagttgcacagaacaca
gctaaccttggaactggtatcatcatatcctttatctatggttggcaactgaccctcttg
ctgttagcagttgttcccatcattgctgtatcgggaattgttgaaatgaaactgttggct
ggaaatgccaaaagagataaaaaagaactggagactgctggaaagattgcaacagaagca
atagaaaatattcggacagttgtgtccttaacccaggaaagaaaatttgaattgatgtat
gttgaaaaattgtatggagcttacaggaattctgtgcggaaggcacacatctatggaatt
acttttagtatttcacaagcatttatgtacttctcctatgctggttgttttcgatttggt
gcctatctcattgtgaacggacatatgcgctttagagatgttattctggtgttttcagca
attgtgtttggtgccgtggctctaggacatgccagttcctttgctccagactatgcgaaa
gccaagctgtccgcagcccacttattcatgctgctggaaagacgaccgctgattgacagc
tacagtgaagaaggcttgaggcctgatacatttgaaggaaacgtgacatttaatgaagtc
gtgttcaactatcccactcgaccagacatccccgtgctgcaggggctgagcctcgaggtg
aagaagggccagacgctggcgctggtgggcagcagcggctgtgggaagagcacggtggtc
cagctgcttgagcggttctacgacccagtggctggagcagtgctcctagatggtcaagaa
gcaaagaaacttaatatccagtggctccgagcccacctgggcattgtgtcccaggagccc
atcctgttcgactgcagcattgcggagaacatcgcctacggagacaacagccgggtcgtg
tcacaggatgaaattgtgaatgcagccaaagcagccaacatacatcctttcatcgagacc
ttaccccataaatatgcaacaagagtgggagataagggaactcagctctcaggaggtcag
aaacagaggattgcgattgcgcgagccctcatcagacaacctcaaatcctgctgttggat
gaagctacatccgccctggatactgaaagtgaaaagattgtccaagaagccctggacaaa
gccagagaaggccgcacctgcatcgtgatcgcgcaccgcctgtccaccatccagaacgca
gacttaatagtggtgtttcagaacggcaaggtcaaggagcacggcacgcatcaacagctg
ctggctcagaaaggcatctacttttccatggtcagtgtccagaatgggaaacagaactta
tga
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integrated database retrieval system
