KEGG   Lutra lutra (Eurasian river otter): 125092798
Entry
125092798         CDS       T08100                                 
Name
(RefSeq) DNA polymerase beta isoform X1
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03410  Base excision repair
llv05166  Human T-cell leukemia virus 1 infection
llv05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125092798
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    125092798
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125092798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:llv03400]
    125092798
Enzymes [BR:llv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125092798
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125092798
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     125092798
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 HHH Cdd1 HHH_2 NTP_transf_2 DUF3900
Other DBs
NCBI-GeneID: 125092798
NCBI-ProteinID: XP_047573161
LinkDB
Position
2:39580196..39607473
AA seq 335 aa
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEEKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcaaacggaaggcgccgcaggagacgctcaacgggggaatcaccgacatgctcaca
gaactcgcaaacttcgagaagaacgtgaaccaggcaatccacaagtacaatgcttacaga
aaagcagcatctgtgatagcgaagtacccacacaaaataaaaagtggagcagaagctaag
aaattgcctggagtaggaacaaagattgctgaaaagattgatgaatttttagcgactgga
aaattgcgtaagctggaaaagattcggcaggatgacacaagttcatctatcaattttctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcagaaaaaatgaagaaaagttgaaccatcatcaacgaattgggttg
aaatattttgaggactttgagaaaagaattcctcgggaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggcgcagagtccagtggtgacatggacgttcttctgacccatccaagcttt
acctctgaatcaaccaaacagccaaagctgttacatcgtgttgtggagcagttacagaag
gtccattttattacagatactctgtcaaaaggtgaaacaaagttcatgggtgtttgccag
cttcccagtaaaaatgatgaaaaggagtatccacacaggagaattgatataaggttgata
cccaaggatcagtattactgcggtgttctctatttcaccgggagtgatattttcaataag
aatatgagagctcatgccttagaaaagggcttcacaatcaatgagtacacaatccgtccc
ttgggagtcactggagtcgctggagagcctctgccagtggatagcgagaaagacatcttt
gactacatccagtggaaataccgagaacccaaggatcggagtgaatga

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