Lutra lutra (Eurasian river otter): 125095879
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Entry
125095879 CDS
T08100
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125095879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125095879
04121 Ubiquitin system [BR:
llv04121
]
125095879
03036 Chromosome and associated proteins [BR:
llv03036
]
125095879
03400 DNA repair and recombination proteins [BR:
llv03400
]
125095879
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125095879
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
125095879
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125095879
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
125095879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125095879
NCBI-ProteinID:
XP_047578376
LinkDB
All DBs
Position
3:complement(25534438..25614146)
Genome browser
AA seq
767 aa
AA seq
DB search
MPGNRQPRVRSGNEPGPAPSMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDHKLSDLEE
DTSRGNLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQVINDEGARQASMYEFVS
SSPPASVSERAKKASTRSRKKQKKKTLAEINQEWNLEAEKEDGELDSKEEFKEKLVSFCS
QPSVIASPRTNGEIDLLASGSVAESQGCGSFTEVSLPLAEHIDSPEMEGRSEDVTPEKKL
CEDPCASGPSGRRGRRSGPSSPIPKRCRSSIPGSSRQRIALADNKPLPGCSSPPSSKLKV
GDTLRRKNSNVSDESMSLSPGTPPSALNSPSYRRMMSSPSAAKLSPTSLLAVKRNHRGET
LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT
GYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLLLPEKND
SSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAATLKAKKCAEFDNTVTHVIVP
GDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEREEKYEIPEGPQRSRLNKEQLLPK
LFDGCYFYFGGTFKYHPKDNLMKLVAAAGGQVLSRKPKPDSDVTQTINTVAYHARPDSDQ
RFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgagggtccgctccgggaacgagcctggtcccgcgcccagt
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgctcgaccggctggag
aagctgctacgctgctcgcgttgcactcatattctgagggagcctgtgtgtttagggggc
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttacaccccagcctggatacaagacgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgaccataagctttcagatttggaagaa
gacacatctaggggaaatttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggttcagtcctcgaagtaagaaggtgcgatacgtcgtgagtaaagtttcagtgcaaacc
cagcctcaggtgataaatgatgagggcgctcggcaggcctccatgtatgaatttgtttct
tcaagtcccccagcaagtgtttctgagagggctaaaaaggcttctacaagatctagaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaacttagaggcagagaaa
gaagatggtgaacttgactccaaagaggagtttaaggagaagctggtgtctttctgcagc
cagccatctgtcatcgctagtcctcggacaaatggcgagatagatttactcgccagtggc
tctgttgcggaatcgcagggttgtggcagcttcactgaagtctctttaccgttggctgag
cacatagactctccagaaatggagggcaggagtgaagatgtgactcccgagaagaagctc
tgtgaggatccttgtgcgtcaggtcccagtgggcgacgtggccgtcgcagcggaccgtcc
agtcccatccctaagcgatgcaggagcagcattcctggctccagcagacagcgcatagcg
cttgcagacaacaaaccattgcctggctgctcctcaccaccctcgagcaaactcaaagtt
ggtgacactctgaggaggaaaaacagtaatgtatcagacgagtccatgagcctctcccca
ggtacaccaccgtctgcactgaacagcccgagttacagacggatgatgtccagcccctca
gcagcgaagctgtcacccactagccttctggctgtgaaaagaaatcatagaggagagact
ctgcttcatattgcttcaattaagggcgacataccttctgttgagtacctcttacaaaat
ggaagtgacccaaatgttaaagaccatgctggatggacaccattgcatgaagcctgtaat
catgggcacctgaaggtagtggagttgttgctacagcataaagcattggtgaacaccact
ggctatcagaatgactcaccgcttcatgatgctgctaagaacgggcacttggatatagtc
aagctcttactttcctacggagcctccaggaacgctgttaacatatttggtttgcggcct
gtggattatgcagacggtgaaaatatgaaatcactattgttgctaccagagaagaatgac
tcatcatccactcgccattgctcagtaacgaacactggtcagcgtagggatggacctctt
gtgcttataggcagtgggctttcttcagaacaacaaaaaatgctcagcgagcttgcagca
actcttaaggctaaaaaatgtgctgaatttgacaatacagtgactcatgtcattgttcct
ggggatacagttcaaagtaccctaaaatgtatgcttgggattctcaatggatgttggatc
ttaaaatttgaatgggtgaaagcatgtctccagagaaaagcatgtgaacgggaggaaaaa
tatgagattcctgaaggaccgcagcgaagcaggctcaacaaggagcagctgttgccaaag
ctgtttgatggatgctacttctattttgggggaaccttcaaataccatccaaaggacaac
cttatgaagcttgtcgctgcagctgggggccaggtcctcagtagaaagcccaagccagac
agtgacgtgactcagaccatcaatacggttgcatatcacgcaagaccggactccgatcag
cgcttctgcacacagtatatcatctacgaagatttgtctaatcatcgcccagagagggtt
cggcagggcaaagtctggatggctccttccagctggtttatcgattgtgtgatgtccttt
gagctgctccctcttgacagctga
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