Lolium perenne (perennial ryegrass): 127327244
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Entry
127327244 CDS
T08650
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127327244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127327244
04121 Ubiquitin system [BR:
lper04121
]
127327244
03036 Chromosome and associated proteins [BR:
lper03036
]
127327244
03400 DNA repair and recombination proteins [BR:
lper03400
]
127327244
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127327244
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
127327244
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127327244
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127327244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4_2
zf-HC5HC2H
zf-RING_2
zf-RING_UBOX
BRCT_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-HC5HC2H_2
RTT107_BRCT_5
zf-rbx1
zf-RING_10
LZ_Tnp_IS66
Motif
Other DBs
NCBI-GeneID:
127327244
NCBI-ProteinID:
XP_051209980
LinkDB
All DBs
Position
1:complement(228014267..228020039)
Genome browser
AA seq
989 aa
AA seq
DB search
MADMGSLEKMGRELKCPICLSLLKSAVSVSCNHIFCNDCLMESMKSSSSCPVCKVPFRRR
EIRPSPHMDNLVGILKSMEAATGTNVVSTQVTSAVEVADGSKPADSKKGPKRSKKSAVQM
KKITSKKEANTTKPTVASASRPTKKSSFSTNKRIHVTPFPESETPVRPRKIMKPEEPTNN
LNQDAQGKDKALASDKSEGISLSPFFWLREREDEVIGTVETLSEPLSLATPLRHNAPCYS
DIKDSEDETPLNTTPNSKVGVPQIFDSEIFEWTQRPCSPELCSTPSKKQGKCKDILDHIS
ETHDEEDIQLSCSFERLDHASNAAQLVHAKEIKQKRKKAQGRNSKKAKLPDHLKVSIKEV
DPNQQDSNSTKHLAAKSCEKNSTTENNTSSRRSKAFNNINLFPCSNYNSSETFLPQDGPE
TEAHDEQLTERYQRKGKNSQQKKSARKLGTTGMSTVETTETNYEPSSKRVRKMPNGVNAE
KIRVINGSRNETETPVLHGFMRSCTQHKLLDGKSKKSKSIGEMNSQIGTSMKSNIGGSTS
SILRGRCQSNEAIHVAPSVMDVSAKNNCAEGIQQIDCSVITNFGKLQACPVRNTFLKKCN
GAVSKVCCAFCQSVDITEVSGEMVHYHNGKQVPTELSGGANVIHSHKNCTEWAPDVYFED
DSVFNLMAELTRSKRIKCACCGVKGAALGCFDKSCRKSFHFTCAKLIPECRWDNENFVML
CPLHQSSKLPNEISEPQKQSKRIIAPKCPSQVKSSQDCKNNWKWPSGSTQKWVLCCSALS
AAEKGVVSEFAKLAGLPISTSWGPSVTHVIASTDLSGACKRTLKFLMAILNGKWIVSIDW
VKACMDHMEPVDETKFEVATDVHGVTGGPRLGRQRVIKKQPKLFDGMRFYLHGDYTKSYR
GFLQDLVIAAGGTVLHRKPVSRDQQKLLDDSSPVIVVYSLENQEKVKFDADQCRRQADDA
QVLACASGGKAATSAWIIDSVAACNLQPL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatgggcagcctcgagaagatggggcgggagctcaagtgtccgatctgtctg
agcttgctcaaatccgcggtatccgtcagctgcaatcacatcttctgcaacgattgcctc
atggagtcgatgaaatcctcctccagctgccctgtgtgcaaggtcccgttccgccgaaga
gaaatacggccatcaccacacatggacaatttggttggcattttgaaaagcatggaggct
gcaacaggaactaatgtggtctcaacacaggtgacttctgcggtggaagttgcagatgga
tcgaaacctgccgacagcaagaaagggcccaaaaggtctaaaaaatcagcggtgcaaatg
aagaagataacatcaaagaaggaagcaaacacaacgaaacctactgtggcttctgcatct
cgtcctactaaaaagtcctctttctctacaaacaagagaatacatgtgacgccgttccct
gaatctgagacaccagtgaggcctcggaagatcatgaagcctgaagagccaacgaataat
ttgaatcaagatgctcaaggcaaagataaagcattggcttctgataaatctgaaggcatt
tcattgtcaccgtttttttggctgagggaaagagaggatgaagtaattggcactgttgaa
acgttaagtgaacctctatcgctggccacacccttgcgccacaatgcaccttgttatagt
gatattaaagattctgaagatgaaacacctcttaatacgactccaaatagcaaagttggg
gttccacaaatttttgatagtgaaatcttcgaatggacccagagaccttgctctccggag
ctgtgttctactccatcgaaaaagcagggtaaatgtaaggatatactagatcacatatca
gaaacacatgatgaggaagatatacagcttagttgttcatttgaaaggttagatcacgca
agtaatgcagctcagcttgtccatgctaaggaaattaagcagaagagaaagaaggcacaa
ggtaggaacagcaagaaggcaaagttgcccgatcatctgaaggtcagcataaaagaagtt
gatcccaatcaacaagattcaaatagtactaaacatcttgctgcaaagtcatgtgagaaa
aacagtaccacagagaataatacttcaagtagaagaagcaaggcttttaacaacatcaat
ctatttccttgctctaattataactcttcagagacatttctccctcaagatggtccggag
actgaagcacatgatgaacaacttacagaaagataccagagaaagggaaaaaatagtcag
cagaagaaaagtgcaaggaagctgggaacaacagggatgagtacagttgagactacagaa
actaactatgagccaagtagtaagcgagttagaaaaatgcccaatggtgtcaatgctgaa
aagataagagttattaatggttctagaaacgaaactgaaacaccagtactccatggtttc
atgagaagttgcacccaacacaaacttttagatggtaaaagtaaaaagagcaagtccatt
ggagaaatgaacagtcagattggaactagcatgaaatcaaacattggtggaagtacatca
agcattttacgtggtagatgccaaagtaatgaggcaatacatgtagctccttcagtaatg
gatgtatctgctaagaacaattgtgcagaaggcattcaacaaatagattgttcagtgatt
actaactttggaaagctccaagcctgccctgtgcgcaatactttcctgaagaaatgtaac
ggtgctgtctctaaggtttgctgtgctttctgccagtctgttgatatcactgaggtgtct
ggtgagatggttcactaccataatggaaaacaagttcccacagagcttagtggaggggct
aatgtcatacattctcacaagaactgcacggagtgggctccagatgtttactttgaagat
gactccgtgtttaatcttatggctgagttaactagaagtaaaaggatcaaatgtgcttgc
tgtggagttaaaggtgcagcgcttggatgctttgacaagagttgtcggaaaagcttccac
ttcacatgtgctaaattgatcccagaatgtagatgggataatgaaaactttgtgatgcta
tgccctttgcatcagtcctccaagttgcctaatgaaatttctgagccacaaaagcaatcc
aaaaggataatagcaccaaaatgtccatctcaggtaaaatctagtcaagattgcaaaaat
aactggaaatggccatctggttcaacacagaagtgggttctctgctgttcagctctttct
gctgccgagaagggagttgtatctgaattcgcgaaattagccggcctgcctatttccaca
agctggggtcctagtgttacccatgttattgcatcaactgacctctctggtgcttgcaag
cgcacactaaaatttctgatggcaatcttgaacggcaaatggatcgtctccatcgattgg
gttaaggcctgcatggatcacatggaacctgttgatgagacgaaatttgaagtcgctact
gatgttcatggggttacaggaggtcccagattaggaagacagagagtaatcaagaagcaa
ccaaagctgttcgatggcatgcggttttacctccatggagactacacaaagtcctacaga
ggcttcctgcaagacctcgtcattgcagccggtggcactgttctgcatcggaagcctgtc
tcaagagaccagcagaagttgcttgatgacagctcccctgtcattgttgtgtacagcctc
gagaatcaggagaaggtgaagtttgatgctgaccagtgccgcagacaggccgatgatgcc
caggtgctggcatgcgcctccggtggcaaagctgcgacaagtgcttggataatcgactcc
gtggcagcttgcaacctgcagcctctgtga
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