Lolium rigidum (rigid ryegrass): 124678714
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Entry
124678714 CDS
T09103
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124678714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124678714
04121 Ubiquitin system [BR:
lrd04121
]
124678714
03036 Chromosome and associated proteins [BR:
lrd03036
]
124678714
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124678714
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124678714
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
124678714
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124678714
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124678714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
PTCB-BRCT
zf-RING_10
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
124678714
NCBI-ProteinID:
XP_047070534
LinkDB
All DBs
Position
7:77885998..77891085
Genome browser
AA seq
612 aa
AA seq
DB search
MRRFLNPLVLNIQKMELELTCPVCLKLLSAPTMLPCSHTSCSTCATTQTMDGYSCAICKI
PYQSQDLRPAYNLEAVVKIHRSLSSTLSSMVAQQGTQGDIPVASQQTPEPGNKNSYNSVA
SKLLYSQSTGPAKAVVDGQKAMNPASNQANDVAVQPTVLVHKGPCRSSQSSDGTRDLDCD
SNDLEGELVASRSPPQNESKRVPDVTDDHTREPKRLKSTDQSEKQRTMTDSWKCEFCHSP
EISKCAGPLLHYLNGEPVKDDQAWKSNVLHVHEKCTEWAPQAFFDGDIVKNLENELARSS
KIKCSVCGLKGAALGCLVRSCRQSFHFPCAHGIPGCRWDEEKFVMLCPSHSSKKLPCEKP
KSKKKAQLQQSSSDAILGDLNSPFPMERNELWTASPFLANEWVICGSALSGRDKEVLGQF
QAQTGITVTNNWTPNVTHVVANTDEKGACGRTLKVLLAILAGKWVLNVNWLKACLEAREP
VPEEPYEISSDVHGSVDGPRTGRLRAIQKAPRLFSGLAFYFIGDVLPMFMADLENLIAMA
GGSILDKAGLSSTSLILYNMEVPPGDDQANIELVMEKRRAEAEELAATVGCRALAHTWVL
DSIAFCKVEFPM
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggttcctcaacccgctggtgctcaacatccagaagatggagctcgagctcacc
tgccccgtctgcctcaagttgctcagcgcgcctacgatgctaccatgttcccacacgtcc
tgcagcacatgtgcgacgacacagaccatggatggctacagctgcgcaatttgcaaaata
ccctaccaatctcaagatttaaggcctgcttataaccttgaggcagtagtgaaaatccac
aggagcctcagctctacgctcagcagcatggtcgcgcagcaggggactcaaggggacatt
cctgttgcatctcaacaaactccagaaccggggaacaaaaattcttacaactctgttgct
tcaaagctgctatatagccaatcaactggacctgcaaaagcagttgtggatggtcagaaa
gcaatgaaccctgcatcgaaccaagctaatgatgtggccgttcagccaacggttcttgta
cacaagggaccatgtaggtcgtctcaatcttctgatggcactagggatctggactgtgac
agcaatgacctggaaggagagttggtagcaagcagatcccctcctcaaaacgagtcgaaa
agagtacctgatgtaacggatgaccatactagggaaccgaagaggctaaagtccacagat
cagagtgaaaaacaacgaactatgactgactcctggaaatgtgaattttgtcactctcct
gaaatcagcaagtgtgctggcccgttgttgcactatctgaatggagaaccagtgaaggat
gatcaagcttggaaatctaatgttctgcatgtccatgagaaatgtactgaatgggctcct
caagcattctttgatggtgatattgtgaagaatttggagaatgagttggcgcgttcttcg
aagatcaagtgcagtgtttgtggattaaaaggtgcagcactaggctgccttgttaggagc
tgccgccaaagctttcatttcccatgtgcccatgggatcccaggctgccgatgggacgaa
gaaaagtttgttatgctgtgtccttcccattcatcaaagaagctgccctgtgagaaacca
aaatcgaaaaagaaggcccagcttcaacaatcatcttctgatgctattcttggcgatttg
aactcaccttttccaatggaaagaaatgaactttggacagcctcaccttttttagcaaat
gaatgggtgatatgcggatctgccctctctggccgagacaaggaagtgttgggtcagttc
caggctcaaactggcatcacagtaactaataactggacgccaaatgtgactcatgtagtc
gctaatacggatgaaaagggtgcatgtggtaggacactgaaggttctcctggccatacta
gctgggaaatgggttctcaatgtaaattggctgaaagcttgcctggaggctagagaacca
gtccctgaggagccatatgagatcagttctgatgttcatggctctgttgatggccctcgc
acaggaagactacgagcaatccaaaaggcaccaagactgttttcagggctggccttctac
tttattggtgatgtcctgccgatgtttatggcggaccttgaaaacttgattgccatggca
ggaggatctatcttggacaaggctggtctctccagcacatccttgattctttacaacatg
gaggttcctcctggagatgatcaggccaacattgagctggttatggagaagagaagggcc
gaggctgaagaactggcagcaacagttggctgcagggctcttgctcatacatgggttctg
gatagcatcgccttctgcaaagtggagtttcccatgtga
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