Lipotes vexillifer (Yangtze River dolphin): 103085060
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Entry
103085060 CDS
T03090
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103085060 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103085060 (BARD1)
04121 Ubiquitin system [BR:
lve04121
]
103085060 (BARD1)
03036 Chromosome and associated proteins [BR:
lve03036
]
103085060 (BARD1)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103085060 (BARD1)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103085060 (BARD1)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103085060 (BARD1)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103085060 (BARD1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103085060 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
103085060
NCBI-ProteinID:
XP_007456473
UniProt:
A0A340X4I6
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MRGNRQPMVRSGNEPHPAPAMEPAGGGAWAHSRAALYRLEKLLRCSRCTNILRDPVCLGG
CEHIFCSNCVSDCIGTACPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDTDFSDLKE
ETSRKSLFSDAEYKKNSIKMWFSPRSKKVRYVVSKVSVQTHPPVINDENAQQASMYEFVS
TSPPVDVSERAKKASTKSGKKQKKKTLAEINQKWNLQAEKEDGKLDSKEEFKEKLVSFCS
QPSVIASPQINGKIDLLASGSVTESECCRSLTEVSLPLAEQIESPEIESRNEVVTPEKTL
CENDLTSKKSLPSGHNGKRGRRNRLSSSVSKRRRSSSPSTGGNSIKQTVLSKHMPLPGCS
SPPSKKLEVGDTVRRKSSNILDESISLSPATPPSPLNSPSYRRMMCSPSAMKLSPSSLMT
MKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL
QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRSAVNIFGLRPVDYTDSENMKS
LLLLPGKNESSSTSHCSVVNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFD
STVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQRKEYEQEEKYEIPEGPHRSR
LNREQLLPKLFDGCYFYFGGTFKHHPKDSLIKLVTASGGQILSRKPKPDSDVTQTINTVA
YHAKPDSDQHFCTQYIIYEDLSNHRPERVRQGKVWMASSSWFIDCVMSFELIPLDS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggaacaggcagccgatggtccgctccggtaacgagcctcatcctgcgcccgcc
atggagccggcagggggcggggcctgggcccatagccgcgccgcgctctaccggctggag
aagctgctgcgctgctcgcgttgcactaatattctgagggaccctgtgtgtttaggagga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccgcatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcgaaatttgctacatgacactgatttttcagatttgaaagaa
gaaacatctaggaaaagtttatttagtgatgcagaatataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtgaggtatgttgtgagtaaagtttcagtgcaaact
catcctcctgtgataaacgatgaaaatgctcagcaggcctccatgtacgaatttgtctct
acaagccctccagtggatgtttctgagagggccaagaaggcatccacaaaatctggaaaa
aaacagaaaaagaaaactttggctgaaatcaaccagaaatggaatttacaggcagaaaaa
gaagatggtaaacttgactccaaagaggaatttaaggagaagctagtatccttctgtagc
caaccatctgttattgctagtccgcagataaatggtaaaatagacttactagcaagtggc
tccgtaacagaatctgaatgttgtagaagcttgactgaagtctctttaccattggctgag
caaattgagtctccagaaattgaaagcaggaatgaagtagtgactcctgagaagacgctc
tgtgaaaacgatcttacatctaagaaatccttgccatcaggtcataatgggaaacgtggg
cgtcgcaacagactttccagttctgtttctaagagacgtagaagcagcagtccgagcacc
ggtgggaattctattaagcaaacagtgctctcaaaacacatgccattgcctggatgttct
tcaccaccttcaaagaagcttgaagttggtgacacagtgaggaggaaaagcagtaatata
ttagatgaatccattagcctttcaccagctacgcccccttctccactgaatagtccaagt
tacagacgaatgatgtgtagtccctcagcaatgaagctatcgcccagtagtcttatgact
atgaaaagaaatcatcgaggagagactttgctccatattgcttcaattaagggcgacata
ccttctgttgaatacctcttacaaaatggaagtgacccgaatgttaaagaccatgctgga
tggacaccattgcacgaagcctgcaatcacgggcacctgaaggtggtggaattgctgctc
cagcacaaagcgttggtgaacaccactgggtatcagaacgactcacctcttcacgacgca
gccaagaatgggcacgtggatatagtcaagctgttactctcctatggagcctccaggagc
gcggttaacatatttggtctgcggcctgtggattatacagacagtgaaaatatgaaatcg
ctgttgctgctaccagggaagaatgaatcatcatcaactagccattgttcagtagtaaac
actggtcagcgcagggatgggcctcttgtacttataggcagtggactttcttcagaacaa
cagaaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgagtttgac
agtacagtaactcatgtcattgttcctggtgatacagttcaaagcaccctgaaatgtatg
cttgggattctcagtggttgctggatcctaaaatttgaatgggtgaaagcatgtctacaa
agaaaagaatatgaacaggaagaaaagtatgaaattcctgaaggaccacatagaagcagg
ctcaacagagaacagctgttgccaaagctgtttgatggatgctatttctattttggggga
accttcaaacaccatccaaaggacagccttattaagcttgtcactgcatctgggggacag
atcctcagtagaaagcccaagccagacagtgatgtgactcaaaccatcaatacagtcgcg
taccatgccaaacctgattctgatcagcacttctgcacacagtatatcatctatgaggat
ttgtctaatcatcgcccagagagagttaggcagggcaaagtctggatggcttcttccagc
tggtttatagattgtgtgatgtcctttgagttgatcccacttgacagctga
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integrated database retrieval system
