Megalobrama amblycephala (Wuchang bream): 125280160
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Entry
125280160 CDS
T08212
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125280160 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125280160 (polb)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125280160 (polb)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
125280160 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
125280160 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
125280160
NCBI-ProteinID:
XP_048066452
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All DBs
Position
LG12:2207856..2214111
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AA seq
336 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANYEKNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAK
KLDGVGAKIAEKIDEFLATGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFYDEGVR
NLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMQKMETLILKELDLVDPEYIGTICGS
YRRGAESSGDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFVTDTLSKGDTKFMGVCQ
LQTEEEDEEEYLHRRIDIRLIPKDQYFCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGVAGEPLLVDSEKDIFDYIQWKYREPKDRSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaaagcgccacaagaaactctgaacgaaggaatcacagatttcctcata
gagttggccaattatgagaaaaatgtcaacagagccatccataaatacaatgcatacaga
aaagcagcgtctgtgatcgccaaatacccacagaagatcaaaagtgggacagaagcaaag
aaactggatggagttggtgcaaagatagcagagaaaattgatgagtttttagcgacagga
aaactgcgtaagctggagaagattcgtaatgacgacacaagctcctccatcaacttctta
accagagtaactggaatcggtcctgctgcggccaggaagttttatgacgagggcgtcagg
aacttggaagatctgaagaagatcgaacacaaactgaaccatcatcagcagatcggctta
aagtactttgaagagtttgagaagagaatccctcgagcagaaatgcagaaaatggagact
ctgatactcaaagaactggatctggtggacccagagtacatcggcaccatctgcggcagc
tacagaagaggagccgagtcgagtggtgatattgatatcctgctgacccatccggacttc
acctctcagtctgagaaacagcccaagcttcttcacgctgttgtggatcatctggagtcc
atcggcttcgtcaccgacacgctgtctaaaggagacactaagttcatgggtgtgtgtcag
ctgcagacagaagaggaggatgaggaggagtatcttcaccgccgtattgacatcaggctc
attcctaaggatcagtatttctgcggcgtgctgtacttcaccggcagtgacatcttcaac
aagaacatgaggactcacgcgctggagaagggcttcactctcaacgagtacaccatccgt
ccactgggcgtcaccggtgtggctggagagcctctgctggtggacagtgagaaggacatc
tttgactacatccagtggaaatacagggaaccgaaggaccgcagcgagtga
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