Moschus berezovskii (Chinese forest musk deer): 129564329
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Entry
129564329 CDS
T09065
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04613
Neutrophil extracellular trap formation
mbez05014
Amyotrophic lateral sclerosis
mbez05034
Alcoholism
mbez05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
129564329 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
129564329 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129564329 (HDAC6)
09165 Substance dependence
05034 Alcoholism
129564329 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mbez01009
]
129564329 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbez03019
]
129564329 (HDAC6)
04131 Membrane trafficking [BR:
mbez04131
]
129564329 (HDAC6)
03036 Chromosome and associated proteins [BR:
mbez03036
]
129564329 (HDAC6)
Enzymes [BR:
mbez01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129564329 (HDAC6)
Protein phosphatases and associated proteins [BR:
mbez01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129564329 (HDAC6)
Messenger RNA biogenesis [BR:
mbez03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129564329 (HDAC6)
Membrane trafficking [BR:
mbez04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129564329 (HDAC6)
Chromosome and associated proteins [BR:
mbez03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129564329 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129564329
NCBI-ProteinID:
XP_055294202
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MNSENPHIYHHHSHFGRHQPCPDSSALQAQPPARPGYVITARRAGSHGEDRVRGEVSPAM
TSTGQNSTTPKERRSRHNPHSPTHDSSITSKRGVKKGAILRSSPNLAEVKKKGRMKKLSQ
TAEQDLIMGLQELNLNLEARTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQ
EGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNSY
TCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQK
HDIQRVLIVDWDVHHGQGIQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQ
GYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPA
GFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLEFPGAPCLSAQ
ASLSCALEALEPFWESLVRTVEILEEKDTVEKDDVEEKEEERLPQSPELSIPIWPVLQAR
TGLVYDQRMMEHYNLWDNYHPEMPQRIHCIMHHLDELGLAKRCHTLPARPATDAELLTCH
SAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVLN
GIAVVRPPGHHAEPHAACGFCFFNTVAVAARHAQAISGHALRILIVDWDIHHGNGTQHIF
EKDPSVLYVSLHRYDHGTFFPMGNEGACTRIGKAAGTGFTVNVAWNGPRMGDADYLAAWH
RLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGHIILILEG
GYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASISETIQVHRRYWRSLRLMKRK
NKEGLSSSKLITKKASQPASSESVKVTTTVEGNILEAGMGQAASEASVKEYTADQTESAT
APIELTQGQSSDTTTQGAALDQTISEGATAEAELIQNPPASCINSRIPPALPMQGATAQT
SPSKLMGNFTILDLNSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFEDHADTDQVMFYAV
RPLLWCPHLAAVCPIPETGLNVTQPCQDCGTLQENWVCLSCYQVYCGRYINAHMLHHHEG
SGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQNKFGEDIPHSD
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagaaaatcctcatatttatcatcaccactcccattttggccgccaccagcct
tgtccagattccagcgctctccaggcacaaccaccagcccgcccgggctacgtcattaca
gcgcgtcgcgcgggaagccacggggaggaccgcgtcaggggtgaggtctccccagccatg
acctccaccggtcagaattccaccacacccaaggagcgaaggagtaggcacaatccccac
tcccccacccacgactccagcatcacctcgaagcgaggtgttaaaaagggtgccatactc
cgctccagccccaatctagcggaggtaaagaagaaaggcagaatgaagaagcttagccaa
acagccgagcaagacctaatcatggggctgcaagagctgaatctgaacctggaggccagg
acactgtctggcactggcttggtgttcgatgaacagctaaatgaattccactgcctctgg
gatgacagcttcccggaaggcccagagcggctccatgccatcaaggagcaactgatccag
gagggcctcctggaccgctgcgtgtcctttcaggcccgattcgctgaaaaggaggagctg
atgttggttcacagcctagaatacattgatctgatggaaacgacccagtacatgaacgag
ggggaactccacgtcctagcagatacctatgactcagtttatctgcatccgaactcatac
acctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggaggct
gagatccggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagtctc
atggatggatattgcatgttcaaccacgtggccgtggctgcccgttatgctcaacagaag
catgatattcagagggtccttatcgtggattgggatgtgcaccatggtcagggaatacag
ttcacctttgaccaagatcctagtgtcctctatttctccatccaccgctacgagcagggt
cggttctggccccatcttaaggcctctaattggtccaccacaggtttaggccaaggccag
ggatacaccatcaatgtgccttggaaccaggtggggatgcaagatgccgactacatcgcc
gctttccttcacgtcctcctgccagtcgcgtttgagttccagccccagctggtcctggta
gctgctggatttgatgccctccaaggagaccccaagggtgagatggccgccactccagca
gggttcgcccagctaacccatctgctcatgggtctggcagaaggcaagctgatcctctca
ctggagggtggctataatctccgctctctggctgaaggcgtcagcgcctccctccacact
cttctgggtgacccctgtcctatgttggagtttcctggtgccccctgcctgagtgcccag
gcgtcactctcttgtgctctagaagcccttgaacccttctgggagagccttgtgagaaca
gttgaaatcctggaggaaaaggacactgtggagaaggatgatgtggaagagaaggaggaa
gagagactgccacagtcccctgagctctccattccgatatggccggtactgcaggctcgc
acggggttggtctatgaccagcggatgatggaacactacaacttgtgggataactaccac
cctgagatgccccagcgcatccactgtattatgcatcacctggatgaactgggccttgcc
aagcgctgccacaccctgcccgcaaggcccgctacggatgctgagctgctcacctgtcac
agtgctgagcacttggaacgcctgcgagccacagagaagatgaagacccgggagctgcgc
cgcgagggcgccaactatgactccatctacatctgctccagcacttttgcctgcgcacag
ctggctgcaggcgccgcctgtcgcctggtggaggcagtactggcaggagaggttttgaat
ggcattgctgtagtgcgacctcctggccaccatgcagaaccccatgcagcttgtggtttc
tgtttttttaatactgtggctgtagctgctcgccatgcccaggccatcagtgggcatgcg
ctgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcatatattt
gagaaggaccccagcgtgctgtacgtttccctgcaccgctacgaccatggcaccttcttt
cccatggggaatgagggtgcctgtaccaggataggtaaagctgcgggcacaggattcact
gtcaatgtggcctggaatgggccccgcatgggtgatgctgactacctggctgcctggcat
cgtctggtacttcccgttgcttatgagtttaacccagaactggtgctggtctcagctggc
tttgacgctgcccggggggatcctctgggcggctgccaggtgtcgcctgagggctatgcc
cacctcacccacctgctgatgggcttggccaatggccatatcatcctaatcctagagggt
ggctataacctgacgtctatctcagagtccatggctgcctgcactcgctccctccttggg
gatccattgcccctgctgacccggctgcggcccccactatcaggagcccaggcttctatc
agtgaaaccatccaagtccatcgaagatactggcgcagtttgcggctcatgaagcgtaaa
aacaaagagggactctccagctctaagttgatcaccaagaaggcatcccaaccagccagt
tctgagtcagtcaaggtgacgaccacagtggaagggaacatcctggaggcaggcatggga
caggccgcctcagaagcatctgtgaaagagtacactgcagatcagactgagtcagcgaca
gctccaatagaacttactcagggccagtcctcagacacaaccacacagggagctgcactg
gaccagaccatctcagagggggccacggcggaagctgagctgatccaaaaccctccagcc
tcatgcatcaacagcaggattcctcctgccttacccatgcaaggagccacagcccagaca
tcccctagtaagctgatgggaaatttcacaatactggacctcaatagcacgactcaggag
ccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacaaatgagtca
gtgccagtgcaggtctttgaagatcatgctgacactgaccaggtcatgttttatgcggtg
agaccactgctttggtgtccccatttggcggcagtgtgccccatacctgagacagggctg
aatgtgacccaaccttgtcaggactgtggaacactccaggagaactgggtgtgtctgtct
tgctatcaggtctactgcggtcgttacatcaatgctcatatgctccaccaccatgaaggc
tcaggacacccactagtactcagctatgccgacctgtctgcctggtgttaccactgccag
gcctatgtccatcacaaggatctcctagcagtgaagaacatcgcccaccagaacaagttt
ggggaagacataccccattcagactaa
DBGET
integrated database retrieval system
