Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_0860
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Entry
JTY_0860 CDS
T00864
Symbol
lpqR
Name
(GenBank) putative lipoprotein
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Pathway
mbt01502
Vancomycin resistance
mbt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JTY_0860 (lpqR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JTY_0860 (lpqR)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mbt01002
]
JTY_0860 (lpqR)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mbt01011
]
JTY_0860 (lpqR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
mbt01504
]
JTY_0860 (lpqR)
Enzymes [BR:
mbt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
JTY_0860 (lpqR)
Peptidases and inhibitors [BR:
mbt01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
JTY_0860 (lpqR)
Peptidoglycan biosynthesis and degradation proteins [BR:
mbt01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
JTY_0860 (lpqR)
Antimicrobial resistance genes [BR:
mbt01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
JTY_0860 (lpqR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
BAH25151
LinkDB
All DBs
Position
936931..937713
Genome browser
AA seq
260 aa
AA seq
DB search
MRLIGRLRLLMVGLVVICGACACDRVSAGRWSESPSATSWPVRPVNTTTPSGPVPPVSEA
ARAAGLVDVRGVVPDAAIDLRYATANNFTGTQLYPPGARCLVHESMAEGLAAAAAVLRPH
GQVLVFWDCYRPHDVQVRMFDVVPNPAWVARPGKYAHSHEAGRSVDVTFASAQRQCPSVR
RSGELCLADMGTDFDDFSSRATAFATQGVSAEAQANRAHLRAAMQAGGLTVYSGEWWHFD
GPGPGPGAGVDRPILEVPVD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgatcgggcggctccgtctgctcatggtggggctggtcgtcatctgcggggct
tgcgcatgtgaccgcgtgtcggccggccgttggtccgagtcgccgagtgcgacctcgtgg
cccgtccggccggtaaacaccacaacgccatccggtcctgtgccgccagtcagcgaggcg
gcgcgggcagccgggttggtcgatgttcgcggtgttgttcccgatgccgccatcgacctg
cgctacgcgacggcgaacaatttcaccggcacacagctgtacccgcccggggcaagatgc
ctggtgcacgagtccatggccgagggtctcgcggccgccgcggcggtgctgcgcccacac
gggcaggtgctggtcttctgggactgctatcggccccacgacgttcaggtcaggatgttc
gatgtggtccccaacccggcctgggtggcgcggccgggcaagtacgcgcatagccatgag
gcggggcgttcggtcgatgtgacgtttgccagcgctcagcggcagtgcccatcagtgcgg
cgatccggcgaattgtgcctggccgacatgggcaccgacttcgacgacttttcttcgcgg
gcgacagcgtttgcaacgcagggcgtcagtgctgaggcccaggccaaccgtgcccacctg
cgagccgccatgcaggccggggggttgacggtgtactccggtgagtggtggcatttcgac
ggccccggccccggccccggcgccggcgtcgatcgcccgattctcgaagtgccagttgac
tga
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