Methanosarcina barkeri MS: MSBRM_1009
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Entry
MSBRM_1009 CDS
T03838
Name
(GenBank) OB-fold nucleic acid binding domain protein
KO
K06932
tRNA(Ile2)-agmatinylcytidine synthase [EC:
6.3.4.22
]
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mby03016
]
MSBRM_1009
Enzymes [BR:
mby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.22 tRNAIle2-agmatinylcytidine synthase
MSBRM_1009
Transfer RNA biogenesis [BR:
mby03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSBRM_1009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1743
tRNA_anti-codon
tRNA_anti_2
Zn_Tnp_IS1595
zinc-ribbons_6
C1_1
OrfB_Zn_ribbon
YdjO
RNA_POL_M_15KD
DZR
DZR_2
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AKB54007
UniProt:
A0A0E3QTH9
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Position
1327781..1329067
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AA seq
428 aa
AA seq
DB search
MIIGIDDTDSNEGMCTTYLGALLLDELQAYGTVETRPLLIRLNPTIPYKTRGNAAVAMKL
KTDCPEKVIAHVVSRIEEFARIECEKTNPGAVFIPEKAYEKLKPVLRNFLEKAVKEVIEI
EEAKSLISESGVPSKGFKNGRGLIGALAACGAMLNLEEWDHTFEYLAYRQKEKWGTPRKI
EKESFFEADRNTYPDTWDTVDLKNRLVVCVPHSADPVLFGIRGKNPAVVTKAVSLIRAEP
IERFAIYRTNQGTDMHLISAESIAEIRDMHSYTLEGTVSAVPETIHGGHVIFPIQDGDGN
EIDCAAFEPTKNFRLLIRKLRPGDRIVVSGSVNSRTFNIEKIEIKKLAPLYREENPVCPT
CGKHMKSSGQNQGFRCKKCGTQATSKILCETNRNLTEGLYEVPPCARRHLAKPLVREQKS
DIEIHPAR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgattatcggaattgatgataccgactcaaacgaaggaatgtgcacaacatatctgggg
gctctgctgctggacgaacttcaagcctacggaactgtagagactcgcccactccttata
cgcctgaatccgactatcccctacaaaacaagaggaaatgctgcagtagcaatgaaactc
aagactgactgccctgaaaaagtaattgctcatgttgtgtccagaatagaggaatttgca
cgcattgaatgcgaaaaaactaaccccggcgcggtttttatcccggaaaaagcttacgaa
aagctcaagcccgtcctcaggaattttctggagaaagccgtaaaggaagtgatcgaaata
gaggaggcaaaaagccttatctcagaatccggggttccttcaaagggcttcaaaaatgga
agaggattgataggcgcccttgcagcatgtggggctatgcttaaccttgaagaatgggat
cacactttcgagtacctggcatacagacaaaaggaaaaatggggaaccccacgcaagatc
gagaaggaaagtttctttgaggcagacaggaacacttatcctgatacctgggacaccgtg
gaccttaaaaacagacttgttgtctgtgtacctcactcggcagatcccgtgcttttcggg
atcagagggaaaaatccagccgtagttacaaaagctgtatccctaatcagggctgaaccc
atagaacgttttgccatatacagaacaaatcagggtactgatatgcacctgatttccgca
gaaagtattgcagaaataagggatatgcactcttacacgctcgaaggcacagtctctgca
gttccagaaactattcacggagggcacgttatttttcccattcaggatggagatggaaac
gaaattgactgcgcagccttcgaacccacaaagaactttcggctgcttataaggaaactc
aggcccggagatagaattgtagtatctggaagtgtaaattccagaactttcaacatcgaa
aaaatagagataaaaaagctcgctcctctttacagggaagaaaacccggtgtgtccaacc
tgcggaaaacatatgaaatcatcaggccaaaaccagggttttcgctgtaaaaaatgcgga
actcaagctacctcaaaaattctgtgtgaaacaaacagaaaccttacagagggattatat
gaagtcccgccctgcgcccgtcggcatcttgcaaaacctcttgtaagggagcagaaatct
gatatagagattcaccctgcccgctaa
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