Methanosarcina barkeri MS: MSBRM_2706
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Entry
MSBRM_2706 CDS
T03838
Name
(GenBank) Coenzyme B synthesis from 2-oxoglutarate: steps 5, 9, and 13
KO
K10978
methanogen homoisocitrate dehydrogenase [EC:
1.1.1.87
1.1.1.-]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00300
Lysine biosynthesis
mby00680
Methane metabolism
mby01100
Metabolic pathways
mby01110
Biosynthesis of secondary metabolites
mby01120
Microbial metabolism in diverse environments
mby01210
2-Oxocarboxylic acid metabolism
mby01230
Biosynthesis of amino acids
mby01240
Biosynthesis of cofactors
Module
mby_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
MSBRM_2706
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSBRM_2706
Enzymes [BR:
mby01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.87 homoisocitrate dehydrogenase
MSBRM_2706
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
AKB55704
UniProt:
A0A0E3QY18
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Position
complement(3548141..3549133)
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AA seq
330 aa
AA seq
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MRLAVIEGDGIGREVIPAAVKVLDAFGLEFEKVSLELGYTRWERTGTAISNDDLETIKGC
DAVLFGAITTVPDPNYKSVLLTIRKELDLYANVRPVKPLPGITGVTGRNDFDFIIVRENT
EGLYSGIEEIGPEISWTKRVVTRKGSKRIAESACKLAKKRKNKLTIVHKSNVLKSDKLFL
DVCRQTASANGVEYEDMLVDSMAYNLIMHPERYDIVVTTNLFGDILSDMCAALVGSLGLV
PSANIGEKYAFFEPVHGSAPDIAGKGIANPLAAILCVKMLLEWMGEPRSQIIDEAIAYVL
QKKIITLDLGGTASTMEVGNAVAEYVVSNM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagactagctgtaatcgaaggtgatggtataggtagggaagtaatccctgcagctgtt
aaagtccttgatgccttcgggcttgagtttgaaaaagtttccctggagcttggctatact
cggtgggaaaggacaggaactgcaatatcaaatgatgatctggaaactataaaggggtgc
gatgctgtcctttttggggcaattactactgtaccggatccgaattacaaaagtgtgctc
ctgacaatacgaaaggaactggacctatatgctaatgtcaggcctgtaaaacctctgccc
ggcataacaggagttacagggagaaacgatttcgattttattattgtcagggaaaacact
gaagggctgtattctggaattgaagaaatagggcctgaaatctcctggacgaaaagagtc
gtcacccggaaaggttccaagcggattgcagaatctgcctgtaagcttgcaaagaaaaga
aagaacaagctgaccattgttcataaatccaatgtcctgaaatccgacaagcttttcctc
gatgtttgcaggcaaaccgccagtgctaacggcgtggaatatgaggatatgctggttgac
tcgatggcttacaaccttattatgcatcctgaaaggtacgacattgtggttacaacgaac
ctcttcggagacattttgagtgatatgtgcgcagcccttgtaggaagtctcggccttgtc
ccaagtgccaatataggggagaaatatgccttcttcgaacctgtgcacgggagcgcacct
gacattgccggaaagggtattgcaaatccgcttgctgcgattctctgtgtaaaaatgctg
ctcgaatggatgggagaacctcggtcgcaaattatcgatgaggcaatagcctatgtgctt
caaaagaaaatcataactcttgacctcggagggacggctagcacaatggaagtcggaaac
gcagttgcggaatatgtggtgagtaatatgtga
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