Malus domestica (apple): 103445590
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Entry
103445590 CDS
T03194
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103445590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103445590
04121 Ubiquitin system [BR:
mdm04121
]
103445590
03036 Chromosome and associated proteins [BR:
mdm03036
]
103445590
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103445590
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103445590
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103445590
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103445590
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103445590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
PTCB-BRCT
Prok-RING_4
zf-RING_5
zf-RING_6
zf-RING_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
103445590
NCBI-ProteinID:
XP_008382823
LinkDB
All DBs
Position
10:complement(27307198..27312699)
Genome browser
AA seq
706 aa
AA seq
DB search
MQRSLSFRTFVSMADPNPNPKCSDSSSTRSTMNPWVLHFQKLGLELKCPLCLNLLNRPTL
LPCNHIFCNSCIPSSSCPVCKAEVADRDLRPVPFMENIVAIYKSLDASFCTNLLQPVSSD
VRTILEQNPISPNISFAGTIAKEPFDNDQGGNSNSGHSIYSSSAHERVWAPCSLNCSVAD
GAGKNGKVKNCSMPIDANGKVLDFARSGLGNPNSQLPRSHIRAGGLEECMTVERDMNHAA
QSLPNSPPSFGDAKCSDNDSCGRRCEQISENSLVRRSISNIDDSRVGQKRHDSCATEIDG
HLRKKIKYEPVSETYSELEYKFSTAPNESFTKRTICAFCQSSTISVVTGPMLHYSKERMV
EGDEANASNVIHVHKICIDWAPQVYFEGENVKRLKAEVLRGAKLKCTKCGLKGAALGCFV
KSCRRSYHVTCAIEISKCRWDKENFLLLCPAHCSTKFPSEKSNYGKPKICPPPNSVEVPD
KVNQWIMCPSGLSSEEKLLLIKFAEKIGATVSRTWRPDVTHVIAALDGDGAYVRTFKTCM
AILAGRWILKIDWVKACMEATDHLNEEPYEVSLDNYGCCDGPKTGRLRATNNDPKLFNGL
SFYFAGDFVLDRKEDLQDLIIAAGGTVFNSSEEVLERSCLEQTASRTLVVYNLDPPEGCK
LGEEVSILWQRSNEAQDIAAKIGSQIIGHTWLLESIARCKLQPFVC
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgctctctgagtttccgaaccttcgtttcaatggcggaccctaaccctaaccct
aagtgcagcgacagtagcagtaccaggtcgacgatgaacccgtgggttcttcattttcag
aaactgggcctcgagctcaagtgcccgctctgcttgaatttgcttaatcggccgacatta
cttccatgcaatcacattttctgcaattcctgcatacccagttcgagttgccctgtttgt
aaagctgaggttgcggatcgagatctcaggcctgtgccattcatggaaaacatagtagcc
atctataaaagcttggatgcgtctttctgcaccaatttgttgcagcccgtttcttctgat
gttagaaccattttggaacaaaaccccatttcgcctaatatcagttttgctggcacaatt
gctaaagaaccatttgacaatgaccaaggcggtaattcaaacagtggacattccatctat
tcgtcgagtgctcatgaacgagtttgggctccttgtagtctaaattgttctgttgctgat
ggagctggcaagaatggcaaagtaaaaaactgtagcatgccaatagatgctaatggcaag
gtattggattttgctagaagtggattgggaaatcccaattcacaactaccgagatctcat
ataagagctggtggactcgaagagtgcatgactgtagaaagagatatgaatcatgcagca
cagtcattgcccaacagtcctccttcatttggtgatgccaaatgttcagataatgatagc
tgtggtcggcgctgtgagcaaatttcagaaaattctttggtcaggagatcgatcagcaac
attgatgatagtagagtagggcagaaaaggcatgatagttgtgcaactgaaattgatggt
catttaagaaagaaaataaagtatgagccagtttcagaaacttattctgagctcgaatat
aagttcagtacagctcctaacgaatcattcacaaagagaacaatttgtgcattttgccag
tcttccacaatctcagtggttacagggccaatgttgcattattctaaagagagaatggta
gagggagatgaggcaaatgcttcaaatgttatacatgttcacaaaatatgcattgattgg
gcaccgcaagtgtattttgaaggtgaaaatgtaaagagattgaaggcagaagtgttaagg
ggtgcgaagctaaaatgcaccaaatgtgggctaaagggagcagctttgggatgctttgtg
aagtcctgccggagaagctatcatgttacctgtgcaattgaaatttctaaatgtcgttgg
gacaaggaaaactttctgctgctctgtccagctcattgttcaactaaatttcccagtgag
aagtcaaattatgggaagcccaaaatctgtccgccacccaacagtgtggaagttccagat
aaagtgaatcaatggatcatgtgcccatccggtttgtcttctgaagagaagcttctttta
atcaagtttgccgagaagattggtgcaactgtgtccaggacctggagaccagatgttaca
catgtgattgcagccctggatggggatggtgcatatgtgaggacattcaaaacttgcatg
gccattttggctggaagatggattctgaaaattgactgggtaaaagcatgcatggaagcc
acagatcatctgaatgaagaaccatatgaagttagtcttgataactatggatgctgtgat
ggcccaaaaactggcaggcttcgggcaacaaacaacgatccaaagctctttaatggtttg
agtttctattttgctggtgattttgtactggatagaaaggaagatcttcaagatttgatc
attgcagcaggaggcacagttttcaacagctcagaagaagtgctggaacgaagttgtctt
gaacagactgcttcaaggacgctagttgtgtacaacctcgacccaccagaaggatgtaag
ttgggggaagaagtttcgatcctttggcaacggtcaaatgaggcccaggatatagctgca
aaaattggatcacaaatcatcggtcacacatggctcttggaatcaattgcgagatgcaag
ttacagccttttgtctgttga
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