Macadamia integrifolia (macadamia nut): 122085091
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Entry
122085091 CDS
T07436
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122085091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122085091
04121 Ubiquitin system [BR:
ming04121
]
122085091
03036 Chromosome and associated proteins [BR:
ming03036
]
122085091
03400 DNA repair and recombination proteins [BR:
ming03400
]
122085091
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122085091
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
122085091
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122085091
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122085091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_6
zf-RING_5
RTT107_BRCT_5
zf-rbx1
zf-Nse
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
122085091
NCBI-ProteinID:
XP_042509466
LinkDB
All DBs
Position
7:complement(6580879..6590730)
Genome browser
AA seq
1074 aa
AA seq
DB search
MDIAHLEKMGRELECPICLSLLDSAISLTCNHVFCNSCILKFMKSGSSCPVCKVPFRRRE
VRPAPHMDNLVNICKSMEVASGISIFTTQTAPSTKISDGQDQGEDKNDLGNPEIGGTSSR
KSKKQRKFKRKSTEQVKTNSKNSGPLLLKRSFPAKKRVQVPQYPLSEAPTRPEKFVAGLG
ESVEKEPMDSSVQQNKKPIFTEMGEPKLSPFFWLKEYDDREDEFCSQHTEGDIVTDTPVK
GPSFSDLKDSDDETPTKMTVNGEVQKESKVVHAFDSEMFEWTQRACSPELCSTPGVNVPP
GTREINKDEPSVIQEERDEIPQICTASTHEGVISENLRIINAKHGTENKNVDLPISVPTT
NKSPMAQNPKRKSTKTAVRTIGRSQSKRVKLSLDGVLGEVPINSNEIENEGSKRNSKGNS
LNLVGKTSKRAKKTSSTSTVSEKTPDVPTKLIEAKIMSQGADNLSADLAVPSNDENVTLR
CKPRKGSDIINAHHEKKPPKTSNSQRVGDAITMLLNEVPMNQNQGFENMNTRVPISSFLK
DKTSETPNLGEKTDTVPKIIKTKVQREKRGKERLNNSADAMYGWDEKTDTVTQKVEIQDQ
TAKGGKQRLKNPIDVMSKDGSVDEAFDNSNKDAAKETESIKNLKETPELKANRRSDTDKK
ILAVANGRFLRKCETLPNKIQCGFCQSFEDSKASGEMMHYFRGKPVASDYDGGSNVMHSH
KNCTEWAPNVYFEDDTAVNLETELARSRRIKCSYCGIKGAALGCYEKSCRKSFHVPCAKL
VPQCRWDAENFVILCPYHASSKLPFEISGHQQKRRKRSIPKGESHAQKTQVLVEDCLTVY
QQWRYPRSSIKWVLCCSALTVAEKDTVSEFAKLAGLSVSKTWCSSVTHIIASTDENGACK
RTLKFLMGVLKGKWILKIDWIKACMDAMEPVDEVQYEINKDIHGIRNGPQLGRLRVLNKQ
PKLFNGFTFYFMGEFVPSYKGYLQDLVVAAGGTVLQRKPISRDQGGQLSESSKSTTLVIY
SLELADKCDPINKTEIWNRRRGDAEALANSTGAKVATNSWVLDSIAACKLQNLP
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggatattgctcatctagaaaagatgggtagagagctggagtgccccatttgcttgagc
ctgctggattcagcaatttcactcacttgcaatcatgtgttctgcaattcatgtattttg
aaattcatgaagtcaggatcaagctgcccggtttgtaaagttccttttcggcggagagag
gttcgccctgctcctcacatggataacttggtaaacatttgtaaaagcatggaagttgct
tcagggatcagcatattcaccacccagactgcaccttcaaccaaaatatcagatgggcag
gaccaaggtgaagacaaaaacgatttaggtaatccagagattggtggaacttcctctaga
aaatccaagaagcagagaaagttcaaaagaaaaagtacagagcaagtgaaaaccaattcc
aagaattctggccctctcctgttgaaacgttcctttccagcgaagaaaagggtacaagtg
ccacagtatcctctgtctgaggccccaactaggcctgagaagtttgttgctggattgggt
gaatctgttgaaaaagagccaatggacagttcagtacaacaaaataagaaaccgattttt
actgaaatgggagagcccaagctctctcctttcttctggctaaaggaatatgatgatagg
gaggatgagttttgcagtcagcacactgaaggtgatattgtcacggatacgcctgtgaag
ggtccttcgtttagtgatctaaaggattcagatgatgagactcccactaaaatgacagtc
aatggtgaagtgcagaaggaatccaaagttgtacatgcttttgacagtgagatgttcgaa
tggactcaaagggcttgctctcctgaactttgttcaacaccaggcgtaaatgtgccacca
ggaactcgggaaataaataaagatgaaccaagtgtcattcaagaggaaagggatgaaatt
ccacagatttgcactgcatctactcatgaaggggtcatttcagaaaatttgagaatcatt
aatgccaagcatggaactgaaaacaaaaacgtggatttgcctatttctgtacccacaaca
aacaaaagtcccatggcccaaaatccaaaaaggaaatctactaagacagctgtgagaacc
attggaagatcccaaagcaagcgtgttaaactatcattagatggtgttcttggagaagtg
cctatcaattcaaacgaaatagagaatgaagggagcaagcgtaacagtaaaggtaattct
ctaaatttggtggggaaaaccagtaagagggctaaaaagactagttctacctctactgtt
tcagagaaaacaccagatgttccaaccaaattaattgaagcaaaaattatgagtcaaggg
gctgacaatttgagtgcagacttagctgttccatcaaatgatgaaaatgtaactttgagg
tgtaaacccagaaaaggcagtgatatcatcaatgctcatcatgaaaagaagcctcctaaa
acatcaaatagccagagagttggtgatgcaataaccatgctgcttaatgaagttcctatg
aatcaaaaccaaggatttgagaacatgaatacccgagtacctatctcatcttttctgaaa
gacaaaactagtgagacccctaatttgggtgagaaaactgacacagtgcctaaaataata
aagaccaaagttcaaagagaaaagagagggaaggagaggttgaataactctgctgatgct
atgtatggctgggacgagaaaactgacacagtgactcagaaggtagagatccaagatcaa
acggcaaagggaggaaagcagaggttgaaaaatcctattgatgttatgtcaaaggatgga
tcggttgatgaagcttttgataattctaacaaggatgctgcaaaggagactgagagcatt
aaaaaccttaaagaaactcctgagcttaaagctaacagaagatcagatacagataagaag
attcttgcagttgctaatggaaggtttctgcgtaaatgtgagactcttcctaataaaatt
cagtgtggtttctgtcagtcttttgaggactcaaaggcttcaggagagatgatgcactat
tttagaggcaagccagttgcttcggattatgatgggggatcaaatgtaatgcattcacac
aagaactgtactgaatgggcacctaatgtgtattttgaagatgatactgctgtcaatctt
gaaactgaattagcgagaagtagaaggattaagtgcagttattgtggaatcaaaggggca
gctcttgggtgttatgagaaaagctgccgcaagagcttccacgttccttgtgccaagtta
gttccacaatgtcgatgggatgctgagaactttgtgattctttgcccttatcatgcttct
tctaaattgccttttgaaatttctggacatcaacagaaaagacgaaagagatcaatacca
aaaggggaatcacatgcccaaaaaacacaagtactggttgaagattgtttgactgtctac
cagcaatggagatatcctcgatcttctatcaagtgggttctttgttgctcagctctcaca
gtagcagagaaggatactgtctctgagtttgcaaaattggccggtctttccgtgtctaag
acatggtgttcaagtgtcacccacatcattgcatctaccgatgagaatggagcttgcaag
agaactttaaaatttttgatgggtgttttgaagggaaaatggatattgaagatcgactgg
attaaggcttgcatggatgccatggaacctgttgacgaggtccaatacgaaatcaataag
gacatacatggaatcaggaatggtcctcagttaggcaggctacgggtccttaacaagcaa
ccaaagcttttcaatgggttcacattctatttcatgggagaatttgtgccttcatacaaa
ggatatctgcaagatctagttgttgcagctggcggaacagttctacagaggaaacccatt
tcaagagatcagggaggacaattatctgagtcctctaaatcaactactttagtgatttac
agccttgagctagcagataaatgtgatcctataaacaagactgagatctggaatcgtaga
aggggtgatgcagaggctttggccaattcaactggagccaaagtggccaccaactcatgg
gtcttggactccattgctgcctgtaagttgcagaaccttccatga
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integrated database retrieval system
