Mustela lutreola (European mink): 131827489
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Entry
131827489 CDS
T09578
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131827489 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131827489 (BARD1)
04121 Ubiquitin system [BR:
mlk04121
]
131827489 (BARD1)
03036 Chromosome and associated proteins [BR:
mlk03036
]
131827489 (BARD1)
03400 DNA repair and recombination proteins [BR:
mlk03400
]
131827489 (BARD1)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131827489 (BARD1)
Ubiquitin system [BR:
mlk04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
131827489 (BARD1)
Chromosome and associated proteins [BR:
mlk03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131827489 (BARD1)
DNA repair and recombination proteins [BR:
mlk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131827489 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
131827489
NCBI-ProteinID:
XP_059024111
LinkDB
All DBs
Position
3:186023531..186106362
Genome browser
AA seq
767 aa
AA seq
DB search
MPGNRQPRVRSGNEPGPAPSMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDDKLSDLEE
DTSRGNLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQVINDEGARQASMYEFVS
ASPPTSVCERAKKASTRSRKKQKKKTLAEINQEWNLEAEREDGELDSKEELKEKLVSFCS
QPSVIASPRTNGEIDLLASGSVAESQGCGSFTEVSLPLAEHIDSPEAEGRSEDVTPEKKL
CENPRASGPSGRRGRRSGPSSPVPKRCRSSIPGTSRQRIVLADNKPLPGCSLPPSSKLKA
GDTLRRKNSNASDESTSLSPGTPPSALNSPSYRRMMSSPSAAKLSPTSLLAVKRNHRGET
LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT
GYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLLLPEKND
SSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNTVTHVIVP
GDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEREEKYEIPEGPQRSRLNKEQLLPK
LFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYHARPDSDQ
HFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgagggtccgctccgggaacgagcctggtcccgcgcccagt
atggagccggaggggcgcggggcctgggcccacagccgcgctgcgctcgaccggctggag
aagctgctgcgctgctcgcgttgcactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccgggtgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgacgataagctttcagatttggaagaa
gacacatctaggggaaatttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggttcagtcctcgaagtaagaaggtgcgatacgttgtgagtaaagtttcagtgcaaacc
cagcctcaggtgataaatgatgagggcgctcggcaggcctccatgtacgaatttgtttct
gcaagtcccccaacaagtgtttgtgagagggctaaaaaggcttctacaagatctagaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaacttagaggcagagaga
gaagatggtgaacttgactccaaagaggagttgaaggagaagctggtgtctttctgcagc
cagccatccgtcatcgctagtcctcggacaaatggtgagatagacttacttgccagtggc
tctgttgcggaatcacagggttgtggcagcttcactgaagtctctttaccgttggctgag
cacatagattctccagaagcggagggcaggagtgaagatgtgactcccgagaagaagctc
tgtgagaatcctcgtgcgtcaggtcccagtgggcgacgtggccgtcgcagcggaccgtcc
agtcccgtccctaagcgatgcaggagcagcattcctggcaccagcagacagcgcatagtg
cttgcagacaacaaaccgttgcctggctgctccttaccaccctcgagcaaactcaaagct
ggtgacactctgaggaggaaaaacagtaatgcatcagatgagtccacgagcctctcccca
ggtacaccaccgtccgcactgaacagcccgagttacagacggatgatgtccagcccctca
gctgcgaagctgtcacccactagccttctggctgtgaaaagaaatcatagaggagagact
ctgcttcatattgcttcaattaagggcgacataccttctgttgagtacctcttacaaaat
ggaagtgacccaaatgttaaagaccatgctggatggacaccattgcatgaagcctgcaat
catgggcacctgaaggtagtggagttgttgctccagcataaggcattggtgaacaccact
ggctatcagaatgactcaccgcttcatgatgctgccaagaatggacacttggatatagtc
aagctgttactttcctatggagcctctaggaatgctgttaacatatttggtttgcggcct
gtggattatgcagacggtgaaaatatgaaatcactattgttgctaccagagaagaatgac
tcatcatccactcgccattgctcggtaacgaacactggtcagcgtagggatggacctctt
gtgcttataggcagtggactttcttcagaacagcaaaaaatgctcagtgagcttgcagca
attcttaaggctaaaaaatgtgctgaatttgacaatacagtgactcatgtcattgttcct
ggggatacagttcaaagtaccctaaaatgtatgcttgggattctcaatggatgttggatc
ttaaaatttgaatgggtgaaagcatgtctccagagaaaagcatgtgaaagggaggaaaaa
tacgagattcctgaaggaccacagcgaagcaggctcaacaaggagcagctgttgccaaag
ctgtttgatggatgctacttctattttgggggaaccttcaaacaccatccaaaggacaac
cttattaagcttgtcgccgcagctgggggccaggtcctcagtagaaagcccaagccagac
agtgacgtgactcagaccatcaatacggttgcgtatcatgcgagaccggactccgatcag
cacttctgcacacagtatatcatctacgaagatttgtctaatcatcgcccagagagggtt
cggcagggcaaagtctggatggctccttccagctggtttatcgattgtgtgatgtccttt
gagctgctccctcttgacagctga
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