Mercenaria mercenaria (northern quahog): 123563104
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Entry
123563104 CDS
T07835
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123563104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123563104
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123563104
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
123563104
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
123563104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
Cdd1
DUF4332
HHH_3
5_3_exonuc
NTP_transf_2
DRE2_N
HHH
Motif
Other DBs
NCBI-GeneID:
123563104
NCBI-ProteinID:
XP_045211629
EnsemblRapid:
LOC123563104
LinkDB
All DBs
Position
2:complement(7078571..7095372)
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKDPNQENPNKEFCDFLMELANYEKNVNRQMHKYNVYRKAAGVLAKHPKRITSGKEA
RGLEGIGDKIGKKIDEFIQTGKLQKLEKIRANDTNVAITELTRVTGIGPAAAQKLVQDGI
TSIEDLRKHTDKLNHHQQIGLKHYEDFEKRIPREEMIQLQDTAFAEIHKVDAEYKAKVCG
SFRRGAESSGDIDILLTHPSFTSTSKKMPDLLKSIVTRLEETKFITDRLSLGDSKFMGVC
KLSDTDDKKHAYRRIDIRLLPHDQYYCALLYFTGSDLFNKDMRGVALEKGFTLNEYTIRP
LGSTGVPGEPLPVTSEEDIFDYLDMAFKKPSERNS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaggaaagatccaaatcaagaaaatcctaacaaagaattctgtgactttcta
atggagttagcaaattatgaaaagaatgtgaatcgacagatgcataagtacaatgtctac
agaaaagctgctggagtcctagccaaacacccaaagagaataacaagtggaaaagaagcg
aggggtttggaagggataggtgataagattggaaagaaaatagatgaattcatacagact
ggaaagttacagaaacttgaaaagatccgtgcaaatgataccaatgttgccattacggaa
ctcactagagtcacaggaattggaccagcagcagcacaaaaactggttcaagatggcatt
acaagcattgaagatctcaggaaacatacagataaattaaaccatcaccagcagattggt
ctcaagcattatgaagactttgagaaaagaattccaagagaagaaatgatacaacttcag
gatacagcatttgcagagattcacaaagtagatgcagagtacaaagcaaaagtttgtggc
agtttcagaagaggagcagaatccagtggggatattgatatccttcttacacacccttca
tttacatccacctcaaagaaaatgcctgatttgttaaaaagcattgtgacaagattggaa
gaaacaaagttcataacagacaggctctcactgggagactcaaagttcatgggtgtgtgc
aaattgtctgacacagatgacaagaagcatgcttacagacgtatagatattcgactgcta
ccacatgaccagtattactgtgctcttctatacttcactggcagtgatttgttcaacaag
gatatgagaggagttgctcttgagaaaggatttacattaaatgaatataccatccgtcct
ttaggcagtacaggtgtaccaggggagccacttcctgtaacatcagaggaagatatcttt
gactacctggacatggctttcaaaaaaccatcagaaagaaattcttga
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