Mus musculus (house mouse): 15185
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Entry
15185 CDS
T01002
Symbol
Hdac6, Hd6, Hdac5, Sfc6, mHDA2
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04613
Neutrophil extracellular trap formation
mmu05014
Amyotrophic lateral sclerosis
mmu05034
Alcoholism
mmu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
15185 (Hdac6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
15185 (Hdac6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
15185 (Hdac6)
09165 Substance dependence
05034 Alcoholism
15185 (Hdac6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmu01009
]
15185 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
15185 (Hdac6)
04131 Membrane trafficking [BR:
mmu04131
]
15185 (Hdac6)
03036 Chromosome and associated proteins [BR:
mmu03036
]
15185 (Hdac6)
Enzymes [BR:
mmu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
15185 (Hdac6)
Protein phosphatases and associated proteins [BR:
mmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
15185 (Hdac6)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
15185 (Hdac6)
Membrane trafficking [BR:
mmu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
15185 (Hdac6)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
15185 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
15185
NCBI-ProteinID:
NP_001123888
MGI:
1333752
Ensembl:
ENSMUSG00000031161
UniProt:
Q9Z2V5
LinkDB
All DBs
Position
X:complement(7796355..7814284)
Genome browser
AA seq
1149 aa
AA seq
DB search
MTSTGQDSSTRQRKSRHNPQSPLQESSATLKRGGKKCAVPHSSPNLAEVKKKGKMKKLSQ
PAEEDLVVGLQGLDLNPETRVPVGTGLVFDEQLNDFHCLWDDSFPESPERLHAIREQLIL
EGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSY
SCACLATGSVLRLVDALMGAEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKK
HRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQ
GYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPA
GFAHLTHLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQ
TSIYCTLEALEPFWEVLERSVETQEEDEVEEAVLEEEEEEGGWEATALPMDTWPLLQNRT
GLVYDEKMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHS
AEYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLSGEVLNG
IAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFE
DDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLAAWHR
LVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGG
YNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSISEVIQVHRKYWRSLRLMKMED
KEECSSSRLVIKKLPPTASPVSAKEMTTPKGKVPEESVRKTIAALPGKESTLGQAKSKMA
KAVLAQGQSSEQAAKGTTLDLATSKETVGGATTDLWASAAAPENFPNQTTSVEALGETEP
TPPASHTNKQTTGASPLQGVTAQQSLQLGVLSTLELSREAEEAHDSEEGLLGEAAGGQDM
NSLMLTQGFGDFNTQDVFYAVTPLSWCPHLMAVCPIPAAGLDVSQPCKTCGTVQENWVCL
TCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQAYVHHEDLQDVKNAAHQNK
FGEDMPHSH
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaagattcttctactagacagcgaaagagtaggcacaatccccag
tcaccccttcaggaatccagcgccaccttgaagcgtggtggaaagaagtgtgctgtaccc
cactccagccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctgagccaa
ccagctgaagaggacctagttgtggggcttcaagggctggatctgaaccctgagacaaga
gtgccagttggtactggattggtgtttgatgaacaactaaatgacttccattgcctttgg
gatgacagcttccctgaaagccctgagcggctccatgccatcagagagcaactgatcctg
gagggcctcctgggccgctgtgtgtcctttcaggcccggttcgctgagaaggaggagctg
atgttggttcacagcctggaatacattgatctgatggagacaacccagtacatgaatgaa
ggggagcttcgagtactggcagaaacctatgattcagtgtatctgcatccgaactcatat
tcctgtgcctgcctggctacaggctctgtcctccggctggtagatgcactcatgggggct
gagattcggaatggcatggccgtcatcaggcctcctggacaccatgctcagcacaatctt
atggatgggtattgcatgttcaaccatctggctgtggctgcccgctatgcgcaaaagaag
caccgcattcagagggttctcatcgtggactgggatgtgcaccatggtcaaggaacacag
ttcatcttcgaccaggaccccagtgtcctttatttctccatccaccgatatgaacatggt
cgcttctggccccaccttaaggcttctaactggtccactataggttttggccaaggccaa
ggatataccatcaatgtaccttggaaccagacgggcatgcgggacgctgactacattgct
gctttcctgcacatcctgctgccagttgcctcggagtttcagcctcaactggtcttggtg
gccgctggatttgatgccctccacggagaccccaagggagagatggctgccacgccagca
ggatttgcccacctaacccatttgctcatgggtttggcaggaggcaagttgattctgtcc
ctggagggtggctataacctccgtgccctggctaagggagtcagtgcttcactccacacc
cttcttggagacccttgccccatgctggagtcctgtgttgtaccttgtgcaagcgcccag
acttccatctactgcactctagaagcccttgaacccttctgggaggtcctggagagatca
gttgagacccaggaggaagatgaagtggaagaagccgtgctagaagaggaggaggaggaa
ggtggctgggaggccactgcactgcccatggatacatggccactgctccagaaccgcact
gggctggtctatgatgagaagatgatgagtcactgcaacctctgggacaatcatcaccct
gagacacctcagcgcatcttacgcatcatgtgtcacctggaggaggtgggccttgcggct
cgctgtctcatcctacctgctcggcctgccctggactctgagctccttacctgccacagt
gctgagtacgtggagcatctccgcaccacagaaaagatgaaaacccgggatctgcaccgt
gaaggtgccaactttgactccatctacatctgccccagcacctttgcctgcgcaaagctt
gccacaggcgctgcctgccgcctggtggaagctgtgctctcgggagaggttctaaatggc
attgcagtagtgcgccctccaggacaccacgcggagccaaatgctgcctgtggtttctgc
tttttcaactcagtagctgtagctgctcgccatgcccagatcattgctggacgtgccctg
cggatcctaatcgtggattgggatgttcatcatggtaatggaactcagcacatatttgag
gatgaccctagtgtattatacgtgtccctgcaccggtatgaccgtggcactttcttcccc
atgggggatgagggtgccagtagccaagtaggccgagatgcaggtataggcttcactgtc
aatgtgccctggaatgggccccgcatgggtgatgctgattacctggctgcatggcatcgt
ctggtacttcccatcgcctatgagtttaacccagaactggtgctgatctcagctggcttt
gatgctgcacaaggggatccgctggggggctgccaagtaacaccggagggttatgcccac
ctcacccacctactgatgggccttgctggtggccgtattattcttattctagagggtgga
tacaatttggcatctatctctgagtctatggctgcctgcacccattccctccttggagac
ccaccaccccagcttactttgctgcgaccgccacagtcaggagccctggtttcaatcagt
gaggtcatccaagtccatcgcaaatactggcgcagtttgcggttgatgaaaatggaagac
aaggaagaatgctctagttctaggcttgtcatcaagaagttgcccccaacagccagtcct
gtatcagctaaggaaatgaccacaccgaaaggaaaggttcctgaagaaagcgtgaggaag
accatagcagcactacctgggaaagagtctactctaggccaggctaaatcaaagatggct
aaggctgtgcttgctcagggccagtcctcagaacaagctgctaagggaactacactggat
ctggctacctcaaaggagactgtgggaggagccacgacggacctgtgggcctcagcagct
gctcctgaaaacttccctaaccagaccacctctgtggaggctttgggagaaactgagcca
acgcctccagcctcgcatacaaacaagcagaccacaggggcttcacctctgcagggagtc
acggctcagcagtccctacagcttggggttctcagcactttggagctaagcagagaagca
gaggaagcccatgattctgaggagggcctgctaggggaagccgctggaggtcaggacatg
aacagcttgatgctgacacaaggatttggggactttaatacccaggatgtattttatgct
gtgaccccactatcctggtgtccccatttgatggcagtatgccccattcctgcagcaggc
ctagatgtgtcccaaccttgtaagacctgtggaacagtccaggagaactgggtgtgtctg
acttgctatcaggtgtactgcagtcgctatgtcaatgcccatatggtctgccaccatgaa
gcctctgaacacccgctggtcctcagctgtgttgacctgtctacctggtgttatgtctgt
caggcttatgtccaccacgaggatctccaagatgtgaagaacgctgcccaccagaacaag
tttggggaggacatgccccactcacactaa
DBGET
integrated database retrieval system