Mustela nigripes (black-footed ferret): 132007732
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Entry
132007732 CDS
T09425
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04613
Neutrophil extracellular trap formation
mnp05014
Amyotrophic lateral sclerosis
mnp05034
Alcoholism
mnp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
132007732 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
132007732 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132007732 (HDAC6)
09165 Substance dependence
05034 Alcoholism
132007732 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mnp01009
]
132007732 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132007732 (HDAC6)
04131 Membrane trafficking [BR:
mnp04131
]
132007732 (HDAC6)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132007732 (HDAC6)
Enzymes [BR:
mnp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132007732 (HDAC6)
Protein phosphatases and associated proteins [BR:
mnp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132007732 (HDAC6)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132007732 (HDAC6)
Membrane trafficking [BR:
mnp04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132007732 (HDAC6)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
132007732 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132007732
NCBI-ProteinID:
XP_059241997
LinkDB
All DBs
Position
X:complement(81954514..81974986)
Genome browser
AA seq
1160 aa
AA seq
DB search
MTSTGQDTTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLT
QATEQDLIVGLHGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHAVQRVLIVDWDVHHGQGTQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTVGFGRG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
QTSLSCALEALEPFWEVLVRSAETLEEDFLEEENAEKEEDGPWQPPALAVPTWPVLQART
GLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHS
AEYVGRLRATAKMKTRELHREGSNFDSIYICPGTFACAQLATGAACRLVEAVLAGEVLNG
AAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFE
EDPSVLYISLHRYDHGTFFPMGDEGASCQTGRAAGTGFTVNVAWNGPRVGDADYLAAWHR
LVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGG
YNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETTHIHRRYWRSLRVMKVED
KEGPSSSKLITKKVTQPANRGSGVGMTAPDRNIPDTDAGKPTSASPVAACTPDQAKSETT
VVEFSQDQTSEAPTGEDTADQTPSEAATGEAAVDQTPSEAAMEGATPDQTPSEEAVGGAE
MIQTPPALCTDNQTPPASPAQGATTQISPSKLTENLRTLDLNSEAQEAADSQIPEDERLL
GEAAGGQDRDASRLTQSFGEHADADQVVLYAVTPLPWCPHLEAVRPVPESGLDVTQPCQD
CGTLQENWVCLSCYQVYCGRYVGAHMLQHHEVSGHPLVLSYIDLSTWCYNCEAYVHHQAL
LDVKNAAHQNKFGECIPHSL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggatactaccacaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacgtcgaagcgaggtgttaagaagggtgcctta
ctccactccagtcctagtctggcagaggtaaagaagaaaggcagaatgaagaagctcacc
caagccacagagcaagacctaatcgtgggcctgcacgggctggatctgaaccttgaggcc
aagacactgtctggcaccggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggaacagctgatc
caggagggccttctggaccgctgcgtgtccttccaggctcgttttgctgaaaaggaggag
ctgatgttggttcacagcctagaatacatcgatctgatggagacaacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttacctgcatccgaactca
tatacctgtgcctgtctggcctcaggctctgtcctcaggctggtggatgcggtcctgggg
aacgagatccggaatggcatggccatcatcaggcctcccggacaccatgcccagcatagt
cttatggatggatattgcatgttcaaccatgtggccgtggctgcccgctacgctcaaaag
aagcacgccgttcagagggtccttatcgtggactgggacgtgcaccatggtcaaggaaca
cagtttgcctttgaccaggaccccagcgtcctctatttttccatccaccgctacgagcag
ggtcggttctggccccacctgaaggcctctaactggtccaccgtaggttttggccgaggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatt
gctgctttcctgcacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactccg
gcagggtttgctcagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgttccctggctgagggtgtcagcgcctccctccac
acccttctgggagacccttgccccatactggagtctcctggtgccccctgcccaagtgcc
cagacgtccctgtcctgtgctctggaagccctggagcccttctgggaggtcctcgtaaga
tcagctgagaccttggaggaggactttctggaggaagagaatgcggagaaggaagaagat
ggaccgtggcagcctccagcgctcgcagtcccgacgtggcccgtgctacaggctcgcacg
gggctggtctatgaccagcggatgatgggtcactacaacttgtgggacaaccaccaccca
gagatgcctcagcgagtctttcggatcatgcgccgtttggaagaactgggccttgcgggg
cgctgccttacattgcccactcgtcccgccacagacgcagaactgctcacctgccacagt
gctgagtacgtaggtcgactgcgggccacagcgaagatgaaaacccgggagctgcaccgc
gagggctccaacttcgactccatttacatctgcccgggcacctttgcctgtgcgcagctg
gccactggcgccgcctgccgcctggtggaggccgtgctggccggagaggttttgaatggc
gctgctgtggtgcggcccccgggacaccacgctgagcgggatgcagcatgtggtttttgc
tttttcaactctgtggctgtggctgctcgccatgcccaagccatcagtgggcatgcgctg
cggatcctcatagtggactgggacgtccatcacggtaatggcactcagcacatatttgag
gaagacccgagcgtgctgtacatctccctgcaccgctatgatcacggcaccttcttcccc
atgggggatgagggtgccagctgccaaacgggccgggctgcgggcactggcttcactgtc
aacgtggcatggaatgggccccgtgtgggcgacgccgactacctggctgcttggcatcgt
ctggtgctccctgttgcctacgagtttaacccggaattggtgctggtctcagctggcttt
gacgctgcacggggtgacccgctggggggctgccaggtgtcacccgagggctatgcccac
ctcacccacctgctgatgggccttgccaatggccgcatcatcttaatccttgagggtggc
tataacctgacatccatctcggagtccatggctgcctgcacccgttccctccttggggac
ccgccaccactgttaaccctgtcgcggcccccactctcaggggccctggcctccatcact
gagaccacccatatccatcgcagatactggcgcagcttgcgggtcatgaaggttgaagac
aaggagggaccctccagttctaagttgatcaccaagaaggtgacccagccagccaaccgt
gggtcaggtgtggggatgactgcaccagacaggaacattccagatacagacgcagggaag
cctacctcagcatcacccgtggcagcatgcactccagaccaagctaagtcagagaccact
gtagtggagttcagccaggaccaaacctcagaggctcccaccggggaagacaccgcggat
cagaccccttcagaggcagccacaggagaggctgcggtggaccagactccttcagaggca
gccatggaaggagccacacctgaccagaccccctcagaggaagctgtggggggagctgag
atgatccaaacccctccagccttatgtactgacaaccagactcctccagcctcccctgcg
caaggagcgacaacccaaatatcccccagtaagctgacagagaatctcaggaccttggac
ctaaacagcgaggctcaggaggcagcagactctcagatcccagaagacgagaggttgcta
ggagaggcagcaggaggtcaggacagggatgcttccaggctgactcagagctttggggag
catgctgacgctgaccaggtcgtgctttatgccgtgacaccgctaccctggtgtccccat
ttggaggcagtacgtcctgtccctgaatcgggcctggacgtgacccagccttgtcaggac
tgtggaacccttcaggagaactgggtgtgtctgtcttgctatcaggtctactgtggccgt
tatgtcggtgcccatatgctccaacaccatgaagtctcaggacacccgctggtcctcagc
tacatcgacctgtctacctggtgttacaactgtgaggcctatgtccaccaccaggctctc
ctggatgtgaagaatgctgctcaccagaacaagtttggggagtgcatacctcactcactc
taa
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