Malania oleifera: 131154808
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Entry
131154808 CDS
T09312
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mof
Malania oleifera
Pathway
mof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131154808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131154808
04121 Ubiquitin system [BR:
mof04121
]
131154808
03036 Chromosome and associated proteins [BR:
mof03036
]
131154808
03400 DNA repair and recombination proteins [BR:
mof03400
]
131154808
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131154808
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
131154808
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131154808
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131154808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-HC5HC2H_2
zf-C3HC4_4
zf-RING_10
Prok-RING_4
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
131154808
NCBI-ProteinID:
XP_057963550
LinkDB
All DBs
Position
5:complement(42427410..42437291)
Genome browser
AA seq
738 aa
AA seq
DB search
MISGTKCCELFLSPKSQPHPMADSPSYARFLNPWVLHLQKLALELKCPVCLNLFTRPMLL
PCNHIFCNTCLPRSNEFGSECPLCKVHSTDRDLRQVPSMENMVTIYKSLDATLSAHLFQT
ISSVGPGNISEQCRVSESMDYDSKSSKEHVDTSQRGPGDSGSGQSILSLTANKRVQNQSY
NYDLNEVVLNAKFDKCTMQSNVEGTNFVLPTRGAVCNYAKGTSEIDMSHVAQSSQDSPPS
FGADSKGLDDDSSDQGSVPTSKNYPAKRSMYESADNEAGKKVIDRPISGAEEGLRDLKRQ
KKLEYGQPEISIKNERDFQPIDLHSSRVQLEPNGEGPPSGMQQHASSDSLDSNKYICAFC
QSFQLSEATGPMLHYASGKPVVGDEATGTSVIHVHRKCIEWAPQVYFVSESVKNLKKELA
RSAKLKCSSCGLKGAALGCYAKSCRKSYHVPCAVQIVDCRWDCENFLVLCPNHSSFKFPN
EKSNYSKHICNKYPAPTERASQKSDFRQASPNGAREWVLCGSALSSEDKFLLVKFATMSG
ATVAKSWSSNVSHVIAATDAQGACTRTLKVLMAILNGKWILTIDWIKACIEAMHPVDEEP
YEVSLDNHGCREGPKTGRFRILDNAPKLFNGLNFYFTGEFLPAYERDLQNLVATAGGTIL
KSKEKLMAQGHEVETTPTTLVVYNLDPPQGCDLGDEVSVVLHRLEEADTLAAEIGSRVIP
HTWLLESIAACKLLPFAS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatttctggaaccaaatgttgtgagctctttctttctcccaaatctcaaccccacccc
atggcggattctcccagctacgctcgcttcctcaacccatgggttcttcatctccagaag
cttgctctggagctcaaatgccctgtctgcttaaatttgttcactcgaccaatgctgctg
ccctgtaatcacatattctgcaacacttgcttacccagatcgaacgagtttggttccgag
tgtcctctctgtaaagtgcattctaccgatcgagatctaaggcaagttccttccatggaa
aatatggtaaccatctataagagcttggacgccactctctctgctcatctctttcaaact
atttcttcagtgggccctgggaacatttcagagcaatgccgggtatcagagagcatggac
tatgatagcaagtctagtaaggaacatgttgacacatctcagaggggtcctggtgattca
ggcagcgggcaatccattctctcattgacagctaacaagcgagttcagaatcagtcttat
aattatgatctaaatgaggtggtccttaatgcaaaatttgataaatgtaccatgcaaagc
aatgtcgaaggcacaaactttgtgttgcctactaggggagcggtttgcaattatgctaaa
gggacttcggaaatagacatgagtcatgtggcacaatcttcacaagatagtcctccttcc
tttggtgctgattccaagggtctagatgatgatagcagtgatcaaggcagtgtgccgacc
tcaaaaaattatccagccaaaagatcaatgtatgaaagtgctgataatgaggcaggaaag
aaagtgattgacagaccgatttccggggctgaagaaggtcttagggatctcaagagacaa
aagaaattggaatatggacaaccagagatcagcataaaaaatgaaagagattttcaacct
atagatttgcattcttccagagttcaattggaacctaatggtgaaggacctccttccggc
atgcagcagcatgcatcttcagattctttggattcaaataaatatatttgtgcgttctgc
cagtcctttcaactttcagaggctacagggccaatgctgcattatgccagtggtaaacca
gtggtgggagatgaggccactggtacgagtgtcatacatgttcataggaaatgcattgag
tgggcaccgcaggtttattttgttagtgaatctgttaagaatttgaagaaagaattggca
aggagtgctaaattaaaatgcagcagttgtggacttaaaggagccgcccttggctgctat
gcaaaatcttgcaggaaaagttatcatgttccttgtgcagtgcaaattgttgactgtcga
tgggattgtgaaaattttctagtgctctgtccaaatcattcatctttcaaatttccaaat
gaaaagtcaaattattcaaagcatatctgtaataaatatcctgcaccgactgaaagggcc
tctcaaaagtcagactttcggcaagcctcacctaatggagctagagaatgggttctatgt
ggatctgctctgtcttctgaagataagtttcttttggtcaagtttgctaccatgagtggt
gcaactgtggccaagtcctggagttcaaatgtcagtcatgtgattgcagccacagatgca
cagggtgcatgcacgaggaccctaaaagttctgatggccattttgaatgggaaatggatc
cttacgattgattggataaaggcatgcatagaagccatgcatccagtggatgaagaacca
tacgaagtcagccttgataatcatggctgtcgtgagggcccgaagactggcagatttaga
atcttggacaatgcgccaaagctttttaatggtttaaatttttatttcactggtgaattt
ctgcctgcttacgagagagacctccaaaatttggttgctaccgccggaggcactattcta
aagagcaaggagaagttgatggcccaaggacatgaagtggaaacaactccaacaacacta
gttgtttataaccttgatcctccgcaaggatgtgatttgggagatgaagtttctgttgtt
ttgcatagactggaagaagcagatactttggctgctgaaattggttcgagagtcattcct
catacctggctgttggaatcaattgcagcatgtaagttgctaccttttgccagctga
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