Monomorium pharaonis (pharaoh ant): 105837009
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Entry
105837009 CDS
T05760
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mpha01009
]
105837009
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105837009
04131 Membrane trafficking [BR:
mpha04131
]
105837009
03036 Chromosome and associated proteins [BR:
mpha03036
]
105837009
Enzymes [BR:
mpha01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105837009
Protein phosphatases and associated proteins [BR:
mpha01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105837009
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105837009
Membrane trafficking [BR:
mpha04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105837009
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105837009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
105837009
NCBI-ProteinID:
XP_012536907
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MTDSKVNLDLFTAAKQLADSEIELIKVIENSSKSQTTATNMLTANTKKTKKSGKSKNARP
SAALLAAKQEAAKRQLLSDKKSNSSFIPDIYQRVIDAYKMTRKETGLVFDRSMAEHECLW
DPNYPECPARFTRVLQRCEELGLVQRCKYVEPRRATESELLSKHSQKQIDILKATDSCTD
TENLELVSSKYDCVYIHPSTYRLSLLAVGSTINLVESVCKGEIQNGMAIIRPPGHHAMKS
EYCGYCFFNNVALAAEKALSSGLANKILIVDWDVHHGQATQQMFYSDPRVVYFSIHRYEH
GEFWPNLRESNFHYVGEDLGEGYNFNVPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLII
VSAGYDAALGCPEGEMLITPACYSHLLSSLLSLANGKVAVILEGGYCLKSLAEGAALTLR
ALLGDPCPLLQTLDLPSSSIRDTILNVIYAHKPYWKCYQYQDTHSINSVTHNKEELANRH
VVTVMYKGSEVKPDKYDTRNCYPVQSKETLETVDKKLNQLIQLTSLRKAPHKVCIVYDET
MQKHCNVFDNTHPEKPSRISNIYKNHEEHGVLQRCHLLQGRSATIEELSLVHSKDYIDDI
KSTSSLKLKELQKQASDYNSVYLHTETWLSACVSAGSLLQVVDAVLNGECQSGVAIVRPP
GHHAEKDIACGFCIFNNIAVAAMYAVQFHHVKRVLIVDWDVHHGNGTQSIFEEDPRILYI
SVHRYDNGSFFPNSKLANYTNVGLNAGEGFNVNIPWNKKGMGNSEYIAAFQQVVMPIAYQ
FNPELVLVSAGFDACIGDTLGGCLVSPELYGHLTHWLSSLANGRIILSLEGGYNINSISH
AMTMCTKALLGDPLPMLDSGLIPCTSAINSINNVLKTHKKFWSNLQYGMSLPKERLLPKL
KTIPNKLEEQGKNVDKPKQMEPKIALEEIESEKLELNLAIDKNRLNLVTDEEISKLTCEV
ENIKIKNFELHATKGEAVEARNSELEQSEVKNLDVSQSIQKCVNETNQPTGSQQENSNIH
EERDNEGAASSQRETQTTTLSEYLSDNLQALTAGEMFAIVPLQDCPHLFTVNEVPAGGID
VTAPCVECASTAENWICLQCYTVHCARSINQHAMQHAEEYEHPITLSFSDISVWCYGCEA
YIDNPRLYAARNAAHQSKFNEELPWTYNESRV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccaaagtaaatctagatttgtttactgctgctaaacaactagcagacagt
gagattgagctgataaaagtgattgagaattccagcaagagtcaaacaactgctacaaac
atgctcactgcaaatacaaagaaaacaaaaaaatctggaaagtcaaaaaatgctcgtcca
tcggctgcgctgttagctgccaagcaagaggcagcaaaacgacagctactgtcagacaaa
aagtccaacagcagcttcataccagacatatatcaacgagtaattgacgcatataaaatg
acgaggaaggagactggtctcgtgttcgatcgaagcatggccgagcacgagtgtctctgg
gatccaaattatcctgagtgcccagctagattcacgcgagttttgcagagatgcgaggag
ctgggcctggtgcagcgatgtaagtacgtcgaaccgagacgtgccacagagagcgagctc
ttgagtaagcatagtcagaaacagattgatatcctaaaggcgacagacagctgtacggat
actgaaaacttggagctggtgtcgtccaagtacgactgtgtctacatccatccgtctacg
tatagattgtctttactagctgtgggctcaacgattaatttggtagagagtgtctgtaaa
ggcgaaatacaaaatggcatggctattattagaccacctggtcatcatgcaatgaaatca
gaatactgtggttattgctttttcaataacgtagctctagcagcggagaaagctttaagt
tctggtttggcgaataagattttaattgtagattgggatgttcatcacgggcaagcgaca
caacaaatgttttacagtgacccacgtgtagtttacttttcaatacatcgttatgagcat
ggtgaattctggcctaatttgagggaatctaactttcattatgttggggaagaccttggt
gagggttacaacttcaacgtacctttaaataaaaccggcatgactaatgctgactatatt
gcgatcttccagcaagttttattgccaatggcttacgaatttcaaccggatttaataata
gtatcggcgggttacgacgcggctctgggttgtccagagggtgaaatgttgataacacca
gcatgttactcacatttactatcgtcattattaagtctggcaaatgggaaagtcgccgtt
attttagaaggtggttattgcctgaaatcattggcagaaggtgcagcattgactttaaga
gctttattaggtgatccatgtccgcttttacaaacacttgatttaccatcgtcaagtata
cgcgatactattctgaatgtaatttacgcacataaaccatactggaaatgttatcaatac
caagacacgcacagcatcaatagtgtaacacacaataaagaggagcttgctaatcgacat
gtagtcactgttatgtacaaaggtagcgaagttaaaccggacaagtatgacacgcgaaat
tgttaccccgtacaaagcaaagaaacattagagactgtggataagaaattgaatcaactg
atacaactaacgagcttacgtaaagcacctcataaagtgtgtatcgtctacgatgagaca
atgcaaaagcactgtaacgtttttgataatactcatccggagaagccaagtcgcatttcc
aacatttacaagaaccacgaagaacacggcgtgttacaacgatgccacttgttacaagga
aggagcgcgacgatagaagaattgtccttggtccattcgaaggactacattgacgacatc
aaaagcacgtcgtctttgaaactcaaggaattgcagaagcaagcgtcggactacaattcc
gtttatcttcacactgaaacgtggttgagtgcctgtgtgtccgctggttccctgctgcaa
gtggtggacgcagttttaaatggcgagtgccaatccggagtagcgatcgtgaggccgccc
gggcaccacgccgaaaaggatattgcgtgtggtttttgtatatttaataacattgctgtg
gccgcgatgtacgccgtacagtttcatcacgtaaaaagagtattaatagtagattgggac
gtgcaccatggaaacggcacccaatctattttcgaggaagatccgaggattctctacatt
tcggttcatcgctacgataacgggagcttctttccgaattccaagctcgctaattatacg
aacgttggcttaaacgcaggcgagggatttaacgtgaacataccgtggaacaagaaggga
atgggaaattccgaatacatagcggccttccaacaagtcgttatgcccatcgcttatcaa
tttaatccagaattagttctggtttcggccggattcgacgcctgcattggtgacacgctc
ggaggttgtctcgtaagtccggaactctatggtcatttgacccattggctctcgtccctg
gccaatggccgtataatcctgagtcttgaaggaggttacaatatcaattccatctcccat
gccatgacgatgtgcaccaaggccctgttgggcgaccctctgccgatgcttgattccggt
cttattccttgcaccagcgcgatcaattctatcaataacgtactaaagactcacaagaag
ttctggtccaatctgcaatatggaatgtccttaccaaaagagaggctacttcccaaactc
aagacgattcctaataaacttgaggaacaaggaaaaaacgtggataaaccgaaacaaatg
gaaccaaagatagccttggaggaaatcgaaagcgagaaactcgagctaaacctggcgatc
gacaaaaaccgcttgaatctagtgacagacgaagaaatctcgaagctaacctgcgaagta
gagaatattaagataaaaaattttgaattgcatgcgacgaaaggtgaagcggtcgaggca
aggaattccgaactggagcagagcgaagtgaaaaatctggatgtttcgcaaagtatacaa
aaatgcgtgaatgagacgaaccaaccaacaggcagccagcaagaaaattctaacatacac
gaggaacgcgataacgagggtgcagcgtcttcacaacgtgagacgcaaaccacaacactc
tcggagtatctttctgacaatcttcaggctctgacagcaggagaaatgttcgcaattgtg
cccttgcaggactgtccgcatttgtttacagtcaatgaggttcctgctggtgggattgat
gtgactgcaccgtgtgtcgaatgtgccagcaccgcggagaattggatctgcttacagtgt
tacaccgtgcattgcgcccgcagtattaatcaacacgcgatgcagcacgcagaggagtac
gaacatcccatcacactcagcttcagcgatatttccgtctggtgttacggttgcgaagct
tatattgataatcctcgattatatgcggcaaggaacgcagctcatcaaagcaagttcaat
gaagagcttccctggacttataacgagagtagagtataa
DBGET
integrated database retrieval system
