Mycobacterium shinjukuense: MSHI_40650
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Entry
MSHI_40650 CDS
T07415
Symbol
lpqR
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj01502
Vancomycin resistance
mshj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MSHI_40650 (lpqR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MSHI_40650 (lpqR)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mshj01002
]
MSHI_40650 (lpqR)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mshj01011
]
MSHI_40650 (lpqR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
mshj01504
]
MSHI_40650 (lpqR)
Enzymes [BR:
mshj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
MSHI_40650 (lpqR)
Peptidases and inhibitors [BR:
mshj01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
MSHI_40650 (lpqR)
Peptidoglycan biosynthesis and degradation proteins [BR:
mshj01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
MSHI_40650 (lpqR)
Antimicrobial resistance genes [BR:
mshj01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
MSHI_40650 (lpqR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
BBX76159
UniProt:
A0A7I7MYD3
LinkDB
All DBs
Position
4432286..4433068
Genome browser
AA seq
260 aa
AA seq
DB search
MRHRRRFLRATLAAMLAAGCGACTVAPVASSDRPSESSTVAPLPVRPVGTTAPPSPGVPP
VGAAASAAGFVDVRAVVPDALIDLRYATTNNVTHTQLYPSGARCLVHQSMAHGLAAAATA
LRPQGQLLVFWDCYRPHNVQITLFNVVSNPAWVARPGPYARSHEAGRSVDVTFASAQPQC
PPERQLRGLCLADMGTDFDDFTARANAFATRDVSAAAQANRARLRDAMNHGGLTTYSGEW
WHFDGPGAGIDHPILDLPID
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcatcgacggcggttcctgcgcgccacgctcgctgccatgctggcagccggctgc
ggtgcctgcacggttgccccggtggcatcgtccgatcggccgtcggaatccagcaccgtc
gcgccgctacccgtgcggcccgtcggcaccaccgcgccgcccagccccggggtgccgccg
gtcggcgccgcggcgagcgcggcgggcttcgtggacgttcgcgctgtggttcccgacgcg
ctgatcgacctgcgctacgcgaccacgaacaacgtcacccacactcagctgtatccctcc
ggtgctcgctgcctcgtgcaccaatcgatggcgcacggccttgcggccgccgcaacggcg
ctgcgcccgcagggacagctgctggtgttctgggactgttaccggccgcacaacgtccag
atcacactgttcaacgtcgtttcgaatcccgcctgggtggcgcgcccggggccgtacgcg
cgcagccacgaggccggacgttcggttgacgtgaccttcgccagtgcgcaaccgcagtgc
ccgcccgagcgccagctgcgcgggctttgcctggccgacatgggaacggacttcgacgac
ttcaccgcgcgggcaaacgcattcgcaacgcgggacgtcagtgccgccgctcaggcgaat
cgggcccggctgcgggacgccatgaaccacggcgggctgaccacctactccggggagtgg
tggcacttcgacggtcccggcgctggcatcgatcacccgattctggacctgcccatcgac
tag
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integrated database retrieval system