Methanobrevibacter smithii: Msm_1405
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Entry
Msm_1405 CDS
T00539
Name
(GenBank) formate dehydrogenase, beta subunit, FdhB
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00680
Methane metabolism
msi01100
Metabolic pathways
msi01120
Microbial metabolism in diverse environments
msi01200
Carbon metabolism
Module
msi_M00356
Methanogenesis, methanol => methane
msi_M00567
Methanogenesis, CO2 => methane
msi_M00617
Methanogen
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Msm_1405
Enzymes [BR:
msi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Msm_1405
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
Msm_1405
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Gene cluster
GFIT
Motif
Pfam:
FrhB_FdhB_C
FrhB_FdhB_N
Fer4_2
Fer4
Fer4_10
Fer4_8
Fer4_16
Fer4_6
Fer4_4
Fer4_9
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ABQ87610
UniProt:
A5UN32
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All DBs
Position
1431103..1432308
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AA seq
401 aa
AA seq
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MAVKNSDMYYAYSNNEGIKEKGEYGGVVTTIMKHLLESNVVDGIVAVKEGFDLYDAVPCL
ITDPEEVIKTAGSIHCGTVNLASFIYKYLDGCRDMKIAVTCKPCDAMSIRELMKKGKIIE
DNVIMIGVNCGGTLPPVPTMQMIRDVYELDPSDVIKEEIAKGKLIMETAEGEKGFGIEDL
EEDGMGRRENCQRCDLKIPSNADLALGNWGVIGPLAGKATFVEVFSDKGADILNDVIEAD
LIAVEEPLEKGIAIRDKINNFMLSASAKKKEADYAGTSGDIIEVFKEYEDEFSKCMKCYG
CREACPLCFCDDCCLEAEGPEWVPGGYTPAAPFFHLTRMVHMVDSCTNCGQCTEVCPCEI
PVAKVWSTVNNKIRDVYGYLPGFDNGEPIPFTEHKPKDNWK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaaaaatagcgacatgtattatgcatactctaacaatgaaggtattaaagaa
aaaggtgaatacggaggagtagttacaactatcatgaaacatcttttagaaagcaatgtt
gttgatggtattgtagctgtaaaagaaggatttgatttatatgatgcagttccatgtctt
ataactgatcctgaagaagttattaaaactgcaggttcaattcactgtggtactgtaaac
ttagctagtttcatatacaaatacttagacggttgcagagatatgaaaatagcagttacc
tgtaaaccttgtgacgcaatgtctataagagaattaatgaaaaagggcaaaatcatcgaa
gacaatgtcataatgattggagtaaactgtggtggaacattacctcctgtaccaactatg
caaatgattagagatgtttatgagttagatcctagtgacgtaattaaagaagaaatcgca
aaaggtaaactcattatggaaactgcagaaggggaaaaaggtttcggtattgaagattta
gaagaagacggtatgggtagaagagaaaactgtcaaagatgtgatttaaaaataccaagt
aacgcagatttagcattaggtaactggggagtaatcggtcctttagcaggaaaagctact
tttgttgaagtattctctgataaaggtgcagatattcttaatgatgtgattgaagctgat
ttaatcgctgttgaagaaccactcgaaaaaggaattgcaataagagacaaaattaataat
ttcatgctctctgcatctgcaaagaaaaaagaagcagattacgcaggtacttccggagat
atcatcgaagtattcaaagaatatgaagacgaattctctaaatgtatgaaatgttacggt
tgtcgtgaagcatgcccattatgtttctgtgatgactgctgtcttgaagctgaaggtcct
gaatgggtacctggtggatacactcctgcagcaccattcttccacttaactcgtatggtg
cacatggtagattcatgtactaactgtggtcaatgtactgaagtttgtccttgtgaaata
cctgtagctaaagtatggagtacagtaaacaacaaaatccgtgacgtatatggatatctc
cctggatttgataatggggaaccaattccattcactgaacacaaaccaaaagataactgg
aaatag
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