Mycobacterium simiae: MSIM_31300
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Entry
MSIM_31300 CDS
T07396
Symbol
lpqR
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
msim
Mycobacterium simiae
Pathway
msim01502
Vancomycin resistance
msim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MSIM_31300 (lpqR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MSIM_31300 (lpqR)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msim01002
]
MSIM_31300 (lpqR)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msim01011
]
MSIM_31300 (lpqR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
msim01504
]
MSIM_31300 (lpqR)
Enzymes [BR:
msim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
MSIM_31300 (lpqR)
Peptidases and inhibitors [BR:
msim01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
MSIM_31300 (lpqR)
Peptidoglycan biosynthesis and degradation proteins [BR:
msim01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
MSIM_31300 (lpqR)
Antimicrobial resistance genes [BR:
msim01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
MSIM_31300 (lpqR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
BBX41679
LinkDB
All DBs
Position
3326718..3327446
Genome browser
AA seq
242 aa
AA seq
DB search
MRFNPAVGRDNGGMPSVRRSAVMLLVAFVTAPPAQASPDVPPVSDAARAAGFVDVRTVVP
DAVIDLRYATPNNFTGTQLYPSDARCLVHQSLSQGLANAASTLRAQGHLLVFWDCYRPHD
VQVRMFNVVPNPAWVARPGPYAHSHESGRSVDVTLTAAGQQCPPEQHAGGLCLADMGTGF
DDFSPRATAYATQGVSADAQANRARLRDAMKYGGLSPYSGEWWHFDGPGAGVDRPILDVP
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgcggttcaaccccgcggtgggccgcgacaatggcgggatgcccagtgttcgccggtcg
gcggtaatgctccttgtcgcgttcgttaccgcaccgcccgctcaggccagtcccgatgta
ccgcccgtcagcgacgccgcacgggccgctggattcgtcgacgtccgcaccgtcgtcccc
gatgccgtcatcgacctgcgttatgcgaccccgaacaacttcacgggcacccagctgtat
ccctccgacgctcgatgccttgtgcaccaatccctgtcccaaggcctcgccaacgccgcg
tccacgctgcgcgcacaaggccacctgctggtgttctgggattgctaccggccgcacgac
gttcaggtccggatgttcaacgtcgttcccaatccggcctgggtggctcggcccggcccg
tacgcgcacagtcacgagtccggacgttcggtggacgtgacattgaccgccgccggacaa
cagtgcccgcccgagcagcacgccggcggtctgtgtctcgctgacatgggtaccggattc
gacgacttttccccgcgcgcaacggcatacgccacccagggcgtcagtgccgatgcccag
gcgaaccgggcccggttgcgagatgcgatgaagtacggcgggttgagcccctactccggg
gaatggtggcacttcgacggacccggcgcgggtgtcgaccgcccgattctcgatgtgccg
gtagactga
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integrated database retrieval system
