Methanosarcina siciliae T4/M: MSSIT_1093
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Entry
MSSIT_1093 CDS
T03865
Name
(GenBank) OB-fold nucleic acid binding domain protein
KO
K06932
tRNA(Ile2)-agmatinylcytidine synthase [EC:
6.3.4.22
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msw03016
]
MSSIT_1093
Enzymes [BR:
msw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.22 tRNAIle2-agmatinylcytidine synthase
MSSIT_1093
Transfer RNA biogenesis [BR:
msw03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSSIT_1093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1743
tRNA_anti-codon
OrfB_Zn_ribbon
RNA_POL_M_15KD
Zn-ribbon_8
Zn_Tnp_IS1595
C1_1
tRNA_anti_2
zinc-ribbons_6
DZR
zf-TFIIB
Rep_fac-A_C
YdjO
Motif
Other DBs
NCBI-ProteinID:
AKB27812
UniProt:
A0A0E3P328
LinkDB
All DBs
Position
complement(1338516..1339802)
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AA seq
428 aa
AA seq
DB search
MIIGIDDTDSNEGMCTTYLGALLLEELQEYGTIETLPLLVRLNPTIPYKTRGNAAVALKL
KTDCPEKVIAHVVSRIEELARMECKKTNPGAAFILEKDYESLKPALLSFLEKAVKDVIEI
ETAKHLISELGISSKSFKNGRGLIGALAACGAMLNLEKWECTFEHLVYRQKEKWGSPRDV
NKDSFFEADRQTYPGTWDTVDLANRLVVCVPHSADPVLFGIRGESPELVNRAASLIRSEP
VERFAVYRTNQGTDMHLLPAASVSEIRDMHSYRLEVTVSTAPKTIEGGHVIFAVRDGKGD
EIDCAAFEPTKNFRALVRKLVPGDRVILSGSVTSGTLNIEKMQVKALVPLYREENPKCPE
CGKHMKSAGKGQGFRCKKCGTQAPSKIRYEAERNLEPGLYEVPPCARRHLAKPLVREKGQ
DIRVHPSR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcggaattgacgatacggactcaaacgaaggcatgtgtaccacatatctggga
gccctgctgctcgaagaactgcaggagtacgggactatagaaaccctgcccctccttgtg
cgcctgaaccctaccatcccctacaagacaagaggaaacgcagccgtagccctgaaactt
aaaacggactgccctgaaaaggtaattgcccatgtggtatccagaatagaggaacttgca
cgcatggagtgcaaaaaaaccaatcccggagccgcatttatcctggaaaaagattacgag
agcctcaagcctgccctcctgagttttctggaaaaagctgtaaaggacgtaatagaaata
gaaacggcaaaacacctcatctcggaactcgggatcagctcaaaaagcttcaaaaacgga
aggggactgataggcgcacttgcagcctgcggggctatgctgaaccttgagaaatgggaa
tgcacttttgaacacctggtatacaggcagaaggaaaaatggggaagtcccagagacgtt
aataaggatagtttttttgaagctgacaggcagacctaccccggaacatgggatacggta
gaccttgcaaacaggctcgtagtctgcgtgccccactcagcagacccggtattattcggg
ataaggggagaaagccccgaactagttaacagagctgcatcccttatcaggtccgaacct
gttgagcgctttgccgtgtaccgaacaaaccagggaacggacatgcatctcctgccggca
gcaagcgtctctgaaattcgggatatgcattcctacaggcttgaagtaacggtctcgaca
gccccgaaaaccattgaaggaggacacgttatctttgctgtccgggatggcaaaggagac
gaaatcgactgtgcagcctttgaaccgactaagaacttcagggcgcttgtccgaaagctg
gtacccggtgaccgggttatcctttcaggaagtgtaacttccggaaccctgaatattgaa
aaaatgcaggttaaagcgcttgtccctctttacagggaagagaaccctaagtgtccggaa
tgcggaaaacacatgaagtccgcagggaagggacagggattccgctgcaaaaaatgcggg
acacaggcaccctctaaaatccggtacgaagccgaaaggaacctggagccaggactctac
gaagtcccaccctgtgccagaaggcaccttgcaaagccgcttgtaagggaaaagggccag
gacataagggttcatccttcaaggtga
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