Macaca thibetana thibetana (Pere David's macaque): 126945539
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Entry
126945539 CDS
T08579
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04613
Neutrophil extracellular trap formation
mthb05014
Amyotrophic lateral sclerosis
mthb05034
Alcoholism
mthb05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
126945539
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126945539
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126945539
09165 Substance dependence
05034 Alcoholism
126945539
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mthb01009
]
126945539
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126945539
04131 Membrane trafficking [BR:
mthb04131
]
126945539
03036 Chromosome and associated proteins [BR:
mthb03036
]
126945539
Enzymes [BR:
mthb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126945539
Protein phosphatases and associated proteins [BR:
mthb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126945539
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126945539
Membrane trafficking [BR:
mthb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126945539
Chromosome and associated proteins [BR:
mthb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126945539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
126945539
NCBI-ProteinID:
XP_050631521
LinkDB
All DBs
Position
X:48489971..48513886
Genome browser
AA seq
1291 aa
AA seq
DB search
MEKKGQGARVPTGRQKLGGASQGRSLRKGLRPVSGAASTARRRRRREGGGGRPKAARDWL
KGNRGRGQASSTMTSTGQDSTTTRQRRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLA
EVKKKGKMKKLGQAMEEDLIAGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEG
PERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLA
DTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMF
NHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLK
ASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDAL
QGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCP
MLESPGAPCRSAQASVSCALEALEPFWEVLVRSSRKWAETVEGDNMEEDNVEENEEEGPW
EPPVLPILTWPVLQSRTGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCL
TLTPRPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATG
AACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRIL
IVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVA
WNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTH
LLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETI
QVHRRYWRSLRVMKIEDREGPSSSKLVTKKAPQPAKPRLAERMTTREKKVLEAGMGKITS
ASSGEESTPGQTKSETAVVALTQDQSSEAATGGATLAQTISEAAVGGAMLGQTTSEEAVG
GATPDQTTSEKTVGGATLDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATL
DQTTSEEAPGGTELIQTPLASSTDHQTPPTSPVQGTTPQISPSTLIENLRTLELGSKSQG
ASESQAPGEENLLGEAAGGQDMADAMLMQGSRGLTDQAIFYAVTPLPWCPHLVAVCPIPA
AGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHENSGHPLVLSYIDLSTWCY
YCQAYVHHQALLDVKNIAHQNKFGEDMPHPH
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaggccagggcgctcgcgtccccacgggtcgccagaaacttggcggagcg
agccaagggcggagtttgagaaaggggctgcgtccagtgagtggagcggcgagtacagcg
cgtcgacggcggaggcgggaagggggcggaggccgaccgaaggcggctagggactggctg
aaggggaaccgcggcaggggtcaagcctcctcaactatgacctcaaccggccaggattct
accacaaccaggcagcgaagaagtaggcagaacccccaatctccccctcaggactccagt
gtcacttcgaagcgaaacattaaaaagggagccgttccccgctccatccccaatctagcg
gaggtaaagaagaaaggcaaaatgaagaagctcggccaagcaatggaagaagacctaatc
gcgggactgcaagggatggatctgaaccttgaggctgaagcactggctggcactggcttg
gtgttggatgagcagttaaatgaattccattgcctctgggatgacagcttcccggaaggc
cctgagcggctccatgccatcaaagagcaactgatccaggagggcctcctagatcgctgt
gtgtcctttcaggcccggtttgctgaaaaggaagagctgatgttggttcacagcctagaa
tatattgatctgatggaaacaactcagtacatgaatgagggagaactccgcgtcctagca
gacacttacgactcagtttatctgcatccgaactcatactcctgtgcctgcctggcctca
ggctctgtcctcaggctggtggatgcggtcctgggggctgagatccggaatggcatggcc
atcattaggcctcctggacatcacgcccagcacagtcttatggatggctattgcatgttc
aaccacgtggctgtggcagcccgctatgctcaacagaaacaccgcatccggagggtcctt
atcgtagattgggatgtgcaccacggtcaaggaacacagttcaccttcgaccaggacccc
agtgtcctctatttctccatccaccgctatgagcagggtaggttctggccccacctgaag
gcctctaactggtccaccacaggtttcggccaaggccaaggatataccatcaatgtgcct
tggaaccaggtggggatgcgggatgctgactacattgctgctttcttgcacgtcctgctg
ccagtcgccctcgagttccagcctcagctggtcctggtggctgctggatttgatgccctg
caaggggaccccaagggtgagatggccgccactccggcagggttcgcccagctaacccac
ctgctcatgggtctggcaggaggcaagctgatactgtctctggagggtggctacaacctc
cgcgccctggctgaaggtgtcagtgcttcgctccacacccttctgggagacccttgcccc
atgctggagtcacctggtgccccctgccggagtgcccaggcttcagtctcctgtgctctg
gaagcccttgagcccttctgggaggttcttgtgagatcaagtaggaagtgggctgagacc
gtggagggggacaacatggaggaggacaatgtagaggagaatgaggaggaaggaccctgg
gagccccctgtgctcccaatcctgacgtggccagtgctacagtctcgcacagggctggtc
tatgaccaaagtatgatgaatcactgcaacttgtgggacagccaccaccctgaggtacca
cagcgcatcttgcggatcatgtgccgtctggaggagctgggccttgctgggcgctgcctc
accctgacaccgcgccccgccacagaggctgagctgctcacctgccacagtgctgagtat
gtgggtcatctccgggccacagagaaaatgaaaacccgggagctgcaccgtgagagttcc
aactttgactccatctacatctgccccagtaccttcgcctgtgcacagcttgccactggc
gctgcctgccgcctggtggaggctgtgctctcgggagaggttctgaatggtgctgctgtg
gtgcgtcccccaggacaccacgcggagcaggatgcagcttgcggtttttgctttttcaac
tccgtggctgtggctgctcgccatgcccaggctatcagtgggcgtgccctgcggatcctg
attgtggattgggatgtccaccatggtaatggaactcagcacatgtttgaggatgacccc
agtgtgctatatgtgtccctgcaccgctatgatcatggcaccttcttccccatgggggat
gagggtgccagcagccagatcggccgggctgctggcacaggcttcaccgtcaacgtggca
tggaacgggccccgcatgggtgacgctgactacctagctgcctggcatcgcctggtgctt
cccattgcctacgagtttaacccagaactggtgctggtctcagctggctttgatgctgca
cggggggacccgctggggggctgccaggtgtcacctgagggttatgcccacctcacccac
ctgctgatgggccttgccagtggtcgcattatccttattctagagggtggctataacctg
acatccatctcagagtccatggctgcctgcactcgctccctccttggagacccaccaccc
ctgctgaccctgccacggccccctctatcaggggccctggcctcaatcactgagaccatc
caagtccatcgcagatactggcgcagcttacgggtcatgaagatagaagacagagaggga
ccctccagttctaagttggtcaccaagaaggcaccccaaccagccaaacctaggttagct
gagcggatgaccacacgagaaaagaaggttctggaagcaggcatgggaaagatcacctcg
gcatcatctggggaagagtccactccaggccagactaagtcagagacagctgtggtggcc
ctcactcaggaccagtcctcagaggcagccacagggggagccacactggcccagaccatc
tctgaggcagccgttgggggagccatgctgggccagaccacctcagaggaggctgtcggg
ggagccactccggaccagaccacctcagagaagactgtgggaggagccactctggaccag
accacctcagaggatgctgttgggggagccacgctgggccagactacctcagaggaggct
gtaggaggagctacactggcccagaccacctcggaggcagccatggagggagccacactg
gaccagactacgtcagaggaggctccagggggcaccgagctgatccaaactcctctagcc
tcgagcacagaccaccagacccccccaacctcacctgtgcagggaactacaccccagata
tctcccagtacactgattgagaatctcaggaccttggagctaggcagcaaatctcagggg
gcctcagaatctcaggccccaggagaggagaacctactaggagaggcagctggaggtcag
gacatggctgatgcgatgctgatgcagggatctaggggcctcactgatcaggccatattt
tatgctgtgacaccactgccctggtgtccccatttggtggcagtatgccccatacctgca
gcaggcctagacgtgacccaaccttgtggggactgtggaacaatccaagagaattgggtg
tgtctctcttgctatcaggtctactgtggtcgttacatcaatggccacatgctccaacac
catgaaaattctggacacccgctggtcctcagctacatcgacctgtcaacctggtgttac
tactgtcaggcctatgtccaccaccaggctctcctagatgtgaagaacatcgcccaccag
aacaagtttggggaggatatgccccacccacactaa
DBGET
integrated database retrieval system
