Thermothelomyces thermophilus: MYCTH_96869
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Entry
MYCTH_96869 CDS
T02231
Name
(RefSeq) histone deacetylase A-like protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mtm
Thermothelomyces thermophilus
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtm01009
]
MYCTH_96869
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_96869
04131 Membrane trafficking [BR:
mtm04131
]
MYCTH_96869
03036 Chromosome and associated proteins [BR:
mtm03036
]
MYCTH_96869
Enzymes [BR:
mtm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MYCTH_96869
Protein phosphatases and associated proteins [BR:
mtm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
MYCTH_96869
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
MYCTH_96869
Membrane trafficking [BR:
mtm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MYCTH_96869
Chromosome and associated proteins [BR:
mtm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
MYCTH_96869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
11507025
NCBI-ProteinID:
XP_003666818
JGI:
96869
UniProt:
G2QPR0
LinkDB
All DBs
Position
7:complement(join(1546295..1546635,1546744..1546918,1547041..1547133,1547196..1547259,1547313..1548904))
Genome browser
AA seq
754 aa
AA seq
DB search
MDIIENDVVMDGEDRRMTDGSSAPNGFLDVTTTGESSIPDATNGQGTSGMSRDEDQDSDP
TAYPEHLRRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEYIMRTFKKNGLVFTG
SDAELIRIIQTEPTKYMWRIPAREATKEEICMVHHPGHFLWVEALSRKSTQELRELSTRM
DQGRDSLYVGSMTYEASLISAGGAIETCKSVVAGVVKNAFAIIRPPGHHAEFDAPMGFCL
FNNVPIAAKICQADYPDLCRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFYP
GKPDNPMTPDGGLEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDLV
IISAGFDAAAGDELGACFVTPSCYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVA
RTLMGEPPPKMEIPKISREAAKVLAKVQAYQAPYWECMRAGIVDVQEMQAQESSRLHDVV
RRAQRQVLSEKHGMLPLYIQRDVLFKSFENQVLVTRGIQSARRILVIVHDPPELHAQPDP
LDNTVEAHNAWVTDGVTRYIDWAIEKGFGVIDVNVPHYITHPEDTDAFIPRADERTLQAQ
VQELMCYIWDNYLQLYDSVEDIFLMGVGNAYLGIKVLLINRLDVKSRVAGVVNFVNGSLR
PVKSDVDSDLSSWYKEHSQVYVANDHACWSDPDLTRKVMKRRFGNVIRAQVNGLTPMMAE
YFADVQQFIMERVTSDEGGRDEGEETEEEESGGR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatcgagaatgatgtcgtcatggatggtgaggaccgccgcatgactgatggc
tcttcggctcccaacggttttctagatgtaactacgacgggggagagttcaatcccggat
gccaccaacggccaaggcaccagcggcatgagccgggatgaagaccaggactctgacccg
acagcttaccccgagcacctgcggcgacgtggcctgctgccgactggttgctgctacgat
gaccgcatgaagctacatgccaatgccgactttgggcctaacccgcatcacccagaggat
ccgtcgcggatcgagtacatcatgagaaccttcaagaagaatggtctggtgttcactggc
tccgacgccgagctcatccgcattatccagaccgagccaaccaagtacatgtggcgaatc
ccggcgagggaagcaaccaaggaggaaatctgcatggttcaccaccctgggcacttccta
tgggttgaagctctgtcccgtaaatcaacccaagagcttcgcgagctgtccacccggatg
gatcaaggcagggactcgctctatgtcggcagtatgacatacgaggcgtcgctgatctcg
gccggcggcgccatcgagacgtgcaaaagcgtggttgccggcgtcgtgaagaacgcgttc
gccatcatccgcccgccgggccatcacgccgagtttgacgcgcccatggggttctgtctc
tttaacaacgttcccattgctgctaaaatctgccaggccgactacccagacctctgccga
aagattctaatcttggactgggacgtgcaccacggcaacggcatccagaacctcttctac
gacgaccccaatatcctctacatttctctccacgtctaccgcaacggcgagttctacccc
ggcaagcccgataacccgatgacgcccgacggcgggctcgagcactgcggtgccgggccc
ggcctaggcaagaacgtcaacatcggctggcacgaccaggggatgggcgacggtgagtat
atggcggccttccagaagatcgtcatgcccatcgcccacgagttcaacccggacctggtc
atcatctcggccggcttcgacgccgccgccggcgacgagctgggagcctgcttcgtcacg
cccagctgctacgcccacatgacgcacatgctcatgtcgctcgccggcggcaaggtggcg
gtctgtctcgagggcggctacgacctcgaggccatctcgaaatcggcgctggccgtcgcc
cggacgctcatgggggagccgcccccgaagatggagatccccaagatcagccgcgaggcg
gccaaggtgctggccaaggtccaggcgtatcaggcgccgtactgggagtgcatgcgcgcc
ggcatcgtcgacgtccaggagatgcaggcgcaggagtcgtcgcgtctgcacgatgtggtg
cgccgggcgcaacgccaggtcttgtccgagaagcacggcatgctgccgttgtatatccag
cgagacgtactattcaagtctttcgagaaccaggtgctggtgactagggggatccagtca
gctcgcaggatcctggtcatcgtccatgacccgccggaactgcatgcccagcctgatccg
ctggacaacacggtggaggctcacaacgcatgggtgacggacggcgtcacgcgttacatt
gactgggccattgagaaaggcttcggagtcatcgatgtcaacgtgcctcactacatcacg
cacccagaggacactgatgccttcatcccacgcgccgacgaacgcacgctccaagcccaa
gtccaagaactaatgtgctatatctgggacaactacctgcagctgtacgactcggtcgaa
gacatcttcctgatgggcgtaggcaacgcctaccttggaatcaaggtcctgctcatcaat
cgactagacgtcaagtcccgggtcgcgggcgtggtcaacttcgtcaacggcagcctgcga
ccggtcaagtcggacgtggacagcgatctgtcgtcgtggtacaaggagcactcgcaggtg
tacgtggccaacgaccacgcgtgctggtccgacccggacctcacgcgcaaggtgatgaag
cgccggttcggcaacgtcatccgcgcgcaggtcaacggcctcacgccgatgatggcggaa
tatttcgcggacgtgcagcagttcatcatggagagggtgacgtcggacgaaggcgggaga
gacgagggggaagagaccgaagaggaggagagtggggggaggtag
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