Mizuhopecten yessoensis (Yesso scallop): 110463489
Help
Entry
110463489 CDS
T05079
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110463489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110463489
04121 Ubiquitin system [BR:
myi04121
]
110463489
03036 Chromosome and associated proteins [BR:
myi03036
]
110463489
03400 DNA repair and recombination proteins [BR:
myi03400
]
110463489
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110463489
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
110463489
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110463489
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110463489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
zf-RING_6
Ank_5
Ank_3
BRCT
BRCT_2
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4
zf-RING_5
Prok-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
110463489
NCBI-ProteinID:
XP_021373784
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAVQFLYTRSALSNLQALLKCSICDGIASSPCTLGSCEHVYCRDCCEGVLGKSCPVCHIP
ADVRDAQVDRQLFTLVTLCQRLEKILTNPEVDSGQSNASGDKMTVMTPMIPTGDHKGFST
ETGINSNLTKQQYRRSTPTKQQSARSTPSKQQSARSTPSKQQSARSTPGKGGRKPGPSCS
PAPKLGNRDSVPANQSTMTQHFGDDAEMTTEDMNVPETMVHGKVSDEVPVSSTTVNNDTR
ILKDSPRSVRPRADFSKSPGPSKILKQKSPQPFVETPEGITRSTPTSANKSKTQRRKSLI
AKNTRNLRLRMLDNSDIESNQIQMKENRQQKKGTNKRHSIGIVTAERSTIVAASGKKRSR
RSLSPAAGSRRSTAIISSSPATRSGGSSRSKLTGLNTSLTGSGKKVVNEMERRNAKGETP
LQVGCIKGDLVKVEELLKGGATPNTRDNAGWTPLHEACHHGYVDIARLLLDHGALIDVPG
TENATPLHDAVSHSRVACVELLVSRGASLTARNLYGYTPMDCARSEEVKAALKTTVQSAP
VVNETVDVLEYQLPCLLGTALNRDQKIALQRCAALLNAKVVQDFCPEVTHVITSSNQDGQ
CPRTIKYLMAVLQGKWVLNMDWVNTCLEYGSRVSEEAFEVPGTSTNPNTLAPQRGRTNSR
LQLPGLFDGCQFYFHGKFEYPTPEKTELIDLVKAGGGLILKREPKVGSLDESTLTVPYHA
DSGCTQCCVFVLHDNSVTFPKIKNSRMCSSPVSWLMDCMSTFKLLNH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcagttcctgtacacacgatcagctttgtctaatctacaggcgctcctcaaa
tgttccatatgcgatgggatcgccagcagtccttgcacactcggcagttgtgaacatgta
tactgcagagactgttgtgaaggtgttttggggaagagctgtccagtctgccacattccg
gcagatgtacgggatgcacaggttgatcgtcagctgttcaccctggttactctgtgtcag
agactggagaagatactgaccaatccagaggtggacagtggccagtccaatgcttcaggt
gacaagatgacagtcatgacaccaatgataccaacaggtgaccacaaaggtttctctact
gagacagggataaactcaaatcttaccaaacaacagtatcgcagatctacccctaccaaa
caacagtctgccagatctacccctagtaagcaacagtctgccagatctacccctagtaag
caacagtctgccagatctaccccaggaaaaggtggtaggaaacctggcccctcgtgtagt
ccagcaccaaaactaggtaaccgagactctgttcctgccaatcagagcaccatgacacag
cactttggtgatgatgctgagatgactacagaggacatgaatgtcccagaaacaatggta
catgggaaggtcagtgatgaggtaccagtaagtagtactactgtcaacaatgatactcgt
atcctcaaagacagccccaggtcggtcagaccaagggcagatttttcaaaatctcctggg
ccttctaaaatattgaaacagaaaagtccacagccttttgttgagacacctgaaggtata
actagatctacaccaacctcagccaataaatcgaaaacccaacgtaggaagagtttgatt
gcaaaaaatacaagaaatttaagattaaggatgttggataactcagacatagagagtaat
caaatacaaatgaaggaaaatagacaacagaagaaagggacgaataaaagacattctatt
ggcattgtcacagctgaaagatctactattgtagcagcttcaggaaaaaagagatcacgt
agaagtttgtctcctgctgcaggaagtaggcgatctacagctattatctcgtcctctcca
gctacaaggtctggagggagctcgaggtcaaagttgacgggactaaacacatccctaaca
ggatcagggaagaaggttgtgaatgagatggagagaagaaatgcaaagggggaaacaccc
ctacaggttgggtgtataaagggtgacttggtgaaagttgaggagctgctgaaaggagga
gctacacctaataccagggacaatgcaggatggacccctctgcacgaagcctgccaccat
ggttatgtagacattgctcgtcttttgctggaccatggagctctgatagatgttcctggg
acagagaatgccacaccccttcatgacgcagtctcccacagtagagtggcatgtgtggag
ctactggtgtccagaggggcctctctcactgcaaggaatctttatggttacacacccatg
gactgtgcacggtctgaggaggtcaaggctgccttgaaaacaactgtccagtctgctcct
gttgtaaatgagacggttgatgtattggagtaccagttgccatgtttgctggggacggcc
ctcaacagagatcagaagattgccctccagaggtgtgcagcactgctcaacgccaaggtg
gtacaagacttttgtcctgaagttacccatgttatcaccagtagtaaccaggacggccag
tgtcctcgtaccattaaatacctgatggcagtgcttcagggcaagtgggtcctcaatatg
gactgggtgaacacctgtctggagtacggcagccgtgtcagtgaggaggcgtttgaggtt
cctggaacaagcacaaatccaaatacactggccccacaaagaggcaggacaaatagcagg
ctacagctccctggtctatttgatgggtgtcagttttactttcatggtaaatttgaatat
cccacaccagagaagaccgaactgatagatcttgtcaaagctggtggaggtctcatcctg
aaaagggagcccaaagtaggcagtttggatgagtcaactttgacagtgccataccatgct
gatagtggctgcacccagtgttgtgtttttgtgctacatgacaattctgtgactttccca
aagataaaaaacagcagaatgtgttcttcaccagtcagctggctcatggactgcatgtca
acattcaagctgttaaatcattga
DBGET
integrated database retrieval system
